Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geospiza_20fortis_20[refseq_20GCF_5F000277835.1_202012-07-25] 27,239 sequences; 1,065,292,181 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq61 120 4e-22 >seq61 Length=4751131 Score = 120 bits (132), Expect = 4e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 213995 CAGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTT 214054 ||||| || || || ||| | |||||||| || || ||| | | | | ||| | Sbjct 4591161 CAGATGATCGATGGAGAAATGTACCCTCCGACGGTGCGGGACACACAGGCAGAGATGCTG 4591102 Query 214055 TACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTC 214114 ||| |||| || || || | | || ||| | |||| | ||| |||| || || Sbjct 4591101 TACCCACCCCATGTGCCTGAGCACCTGCGCTTCTCCGTGGGGCAGGAGGTGTTCGGGCTG 4591042 Query 214115 GTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGAC 214174 ||||| || ||||| ||||||||| ||||||||| | ||||||||| | || |||||| Sbjct 4591041 GTGCCGGGGCTCATGATGTACGCCACGATCTGGCTGCGCGAGCACAACCGCGTCTGCGAC 4590982 Query 214175 GTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 ||||| || || ||||||| || ||| ||||||| ||||| ||||||| Sbjct 4590981 GTGCTCAAGCACCAGCACCCCGAGTGGGACGACGAGCAGCTCTTCCAGA 4590933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723094511499360