Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geospiza_20fortis_20[refseq_20GCF_5F000277835.1_202012-07-25] 27,239 sequences; 1,065,292,181 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq32 127 2e-24 >seq32 Length=6925586 Score = 127 bits (140), Expect = 2e-24 Identities = 121/155 (78%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 32676 TGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGAGA 32735 |||| |||| | |||||||||| || || ||| | ||||| | |||||||| |||| Sbjct 3215259 TGGTGGTATTATGTCTCTAAAGGAATTGAGTATTTGGATACAGTATTCTTCATCCTGAGG 3215200 Query 32736 AAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTTTA 32795 ||||||||||||||| |||| || | || || || |||||||| |||||||| || || Sbjct 3215199 AAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTCACCATGTTCACCTTG 3215140 Query 32796 GGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 | ||||| || ||||| ||| ||||||| ||||| Sbjct 3215139 TGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 3215105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602975424477360