Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq329300 603 3e-168 seq329963 598 1e-166 seq329097 590 2e-164 >seq329300 Length=337 Score = 603 bits (668), Expect = 3e-168 Identities = 336/337 (99%), Gaps = 0/337 (0%) Strand=Plus/Plus Query 27147 TAACCCACTGTTATTCATGTTGCATGGTGCACTGTTTATACCAACGATATAGTCTATTAA 27206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TAACCCACTGTTATTCATGTTGCATGGTGCACTGTTTATACCAACGATATAGTCTATTAA 60 Query 27207 TGCATATATAGTATCGCCGAACGATTAGCTCTTCAGGCTTCTGAAGAAGCGTTTCAAGTA 27266 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TGCATAGATAGTATCGCCGAACGATTAGCTCTTCAGGCTTCTGAAGAAGCGTTTCAAGTA 120 Query 27267 CTAATAAGCCGATAGATAGCCACGGACTTCGTAGCCATTTTTCATAAGTGTTAACTTCCG 27326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CTAATAAGCCGATAGATAGCCACGGACTTCGTAGCCATTTTTCATAAGTGTTAACTTCCG 180 Query 27327 CTCCTCGCTCATAACAGACATTCACTACAGTTATGGCGGAAAGGTATGCATGCTGGGTGT 27386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CTCCTCGCTCATAACAGACATTCACTACAGTTATGGCGGAAAGGTATGCATGCTGGGTGT 240 Query 27387 GGGGAAGTCGTGAAAGAAAAGAAGTCAGCTGCGTCGTTTGACATCACTGCTATCTTCTTA 27446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GGGGAAGTCGTGAAAGAAAAGAAGTCAGCTGCGTCGTTTGACATCACTGCTATCTTCTTA 300 Query 27447 CTGGTTATGCAGGTCGTAGTGGGTGGCACACAAAGCT 27483 ||||||||||||||||||||||||||||||||||||| Sbjct 301 CTGGTTATGCAGGTCGTAGTGGGTGGCACACAAAGCT 337 >seq329963 Length=346 Score = 598 bits (662), Expect = 1e-166 Identities = 341/346 (99%), Gaps = 1/346 (0%) Strand=Plus/Minus Query 6756 TTCCGTTCCTTCAAAGCCGTCAAGGAGAAGCTGGATACCCGTCGTGGCTCTAATTCCGAG 6815 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 346 TTCCGTTCCTTCAAAGCCGTCAAGGAGAAGCTGGATACCCGTCGTGGCTCTAATTCCGAG 287 Query 6816 CTGGAGACAGCGGTGAAAGACCTGGGCAAAGCGGTGTCCTATAAGGGGATGTATGGCGAT 6875 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 286 CTGGAGACAGCGGTGAAAGACCTGGGCAAAGCGGTGTCCTATAAGGGGATGTATGGCGAT 227 Query 6876 GTGGCCATCGTCGTGTATTCCGGACAGTACGTGGAAAACGGCGTCAAAAAGAACTTCCTG 6935 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 226 GTGGCCATCGTCGTGTATTCCGGACAGTACGTGGAAAACGGCGTCAAAAAGAACTTCCTG 167 Query 6936 CCGGACAACACGATGGTGCTGGGGAACACTCAGGCACGCGGTCTGCGCACCTATGGCTGC 6995 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 166 CCGGACAACACGATGGTGCTGGGGAACACTCAGGCACGCGGTCTGCGCACCTATGGCTGC 107 Query 6996 ATTCAGGATGCGGACGCACAGCGCGAAGGCATTAACGCCTCTGCCCGTTACCCG-AAAAA 7054 ||||||||||||| ||||||||||||||||||| | |||||||||||||||||| ||| | Sbjct 106 ATTCAGGATGCGGCCGCACAGCGCGAAGGCATTCAGGCCTCTGCCCGTTACCCGCAAACA 47 Query 7055 CTGGGTGACCACCGGCGATCCGGCGCGTGAGTTCACCATGATTCAG 7100 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 46 CTGGGTGACCACCGGCGATCCGGCGCGTGAGTTCACCATGATTCAG 1 >seq329097 Length=330 Score = 590 bits (654), Expect = 2e-164 Identities = 329/330 (99%), Gaps = 0/330 (0%) Strand=Plus/Minus Query 4185 CGGTCGTATGGCCATCGATGGTCTGAAAGAAGTTCAGGAAGCGGTGATGCTGATAGAAGC 4244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 330 CGGTCGTATGGCCATCGATGGTCTGAAAGAAGTTCAGGAAGCGGTGATGCTGATAGAAGC 271 Query 4245 CGGACTGAGTACCTACGAGAAAGAGTGCGCAAAACGCGGTGACGACTATCAGGAAATTTT 4304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 270 CGGACTGAGTACCTACGAGAAAGAGTGCGCAAAACGCGGTGACGACTATCAGGAAATTTT 211 Query 4305 TGCCCAGCAGGTCCGTGAAACGATGGAGCGCCGTGCAGCCGGTCTTAAACCGCCCGCCTG 4364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 210 TGCCCAGCAGGTCCGTGAAACGATGGAGCGCCGTGCAGCCGGTCTTAAACCGCCCGCCTG 151 Query 4365 GGCGGCTGCAGCATTTGAATCCGGGCTGCGACAATCAACAGAGGAGGAGAAGAGTGACAG 4424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 150 GGCGGCTGCAGCATTTGAATCCGGGCTGCGACAATCAACAGAGGAGGAGAAGAGTGACAG 91 Query 4425 CAGAGCTGCGTAATCTCCCGCATATTGCCAGCATGGCCTTTAATGAGCCGCTGATGCTTG 4484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 90 CAGAGCTGCGTAATCTCCCGCATATTGCCAGCATGGCCTTTAATGAGCCGCTGATGCTTG 31 Query 4485 AACCCGCCTATGCGCGGGTTTTCTTTTGTG 4514 ||||||||||||||||||||||||||||| Sbjct 30 CACCCGCCTATGCGCGGGTTTTCTTTTGTG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154426333686560