Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq325931 587 6e-163 >seq325931 Length=392 Score = 587 bits (650), Expect = 6e-163 Identities = 356/387 (92%), Gaps = 0/387 (0%) Strand=Plus/Minus Query 3851 CATTTTCAAATGATTCACAGTTAATTTGCGACAATATAATTTTATTTTCACATAAACTAG 3910 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 392 CATTTTCAAATGATTCACAGTTAATTTGCGACAATATAATTTTATTTTCACATAAACTAG 333 Query 3911 ACGCCTTGTCGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCCTCATAAAAAT 3970 |||||||||||||| ||||||||||||||| Sbjct 332 ACGCCTTGTCGTCTTCTTCTTCGTATTCCTTCTCTTTTTCATTTTTCTCCTCATAAAAAT 273 Query 3971 TAACATAGTTATTATCGTATCCATATATGTATCTATCGTATAGAGTAAATTTTTTGTTGT 4030 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 272 TAACATAGTTATTATCGTATCCATATATGTATCTATCGTATAGAGTAAATTTTTTGTTGT 213 Query 4031 CATAAATATATATGTCTTTTTTAATGGGGTGTATAGTACCGCTGCGCATAGTTTTTCTGT 4090 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 212 CATAAATATATATGTCTTTTTTAATGGGGTGTATAGTACCGCTGCGCATAGTTTTTCTGT 153 Query 4091 AATTTACAACAGTGCTATTTTCTGGTAGTTCTTCGGAGTGTGTTGCTTTAATTATTAAAT 4150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 152 AATTTACAACAGTGCTATTTTCTGGTAGTTCTTCGGAGTGTGTTGCTTTAATTATTAAAT 93 Query 4151 TTATATAATCAATGAATTTGGGATCGTCGGTTTTGTACAATATGTTGCCGGCATAGTACG 4210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 92 TTATATAATCAATGAATTTGGGATCGTCGGTTTTGTACAATATGTTGCCGGCATAGTACG 33 Query 4211 CAGCTTCTTCTAGTTCAATTACACCAT 4237 ||||||||||||||||||||||||||| Sbjct 32 CAGCTTCTTCTAGTTCAATTACACCAT 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426469491746975