Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq41976 87.8 2e-12 seq155112 86.0 7e-12 >seq41976 Length=14171 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || || |||| ||||| | |||||| || ||||| || |||||||| || ||||| ||| Sbjct 8403 AGCCCTGTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGC 8462 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || || || ||||| || || || | ||| || || ||||| || | || || Sbjct 8463 ACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGA 8522 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || ||||||||||| ||| ||||| || |||| ||||| Sbjct 8523 ACATAGAACTGGCAAAGGGCATGGCATGGTGGCAAAGCCAT 8563 >seq155112 Length=408 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/86 (85%), Gaps = 3/86 (3%) Strand=Plus/Minus Query 156365 CCGCACTGCCCGGCCAGGGCCATCTCCGCGCAG-CAGGCGATCAGCCCCCCGTCGCTCAC 156423 ||||| | ||||||| |||||||||| |||| ||| | | |||||||||||||||||| Sbjct 218 CCGCAGTTGCCGGCCATGGCCATCTCCA-GCAGGCAGCCCAGCAGCCCCCCGTCGCTCAC 160 Query 156424 GTCGTGGCCCGCGGTCACCAGCCCGC 156449 ||||||||||||| ||| || ||||| Sbjct 159 GTCGTGGCCCGCGCTCAGCA-CCCGC 135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587439562381800