Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq833 105 6e-18 seq76856 95.1 1e-14 seq52800 82.4 7e-11 >seq833 Length=14924 Score = 105 bits (116), Expect = 6e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 |||||||||| ||||||||||| || || || || | ||| ||||||| || | || | Sbjct 5287 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 5346 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | ||||||||| ||||| || || || |||||||| || || |||||||||||||| | Sbjct 5347 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGG 5406 Query 14346 C 14346 | Sbjct 5407 C 5407 >seq76856 Length=2926 Score = 95.1 bits (104), Expect = 1e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 14457 TCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGT 14516 ||||||||| | | |||||| || |||||||| | || |||||||| || ||||||| Sbjct 1651 TCTCTTTAGAATCTTTAATGTAGGTGTCAATAAGAAGACTGTACATTTCTGAATGTATGT 1710 Query 14517 TTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG 14558 ||||||| || ||||| || ||||| ||||| | |||||||| Sbjct 1711 TTTCCATGGCAATCTGGAAGCCATAGAAACAACGAGCTTCTG 1752 >seq52800 Length=5892 Score = 82.4 bits (90), Expect = 7e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 13895 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13954 || || || || ||||| | |||||||||| |||| ||||||||||| || || || Sbjct 1804 TTCGACATGACTCCCATCCTCTGATATTCACCTACTCGCTTTTCAAAGAAATTGGTCTTG 1745 Query 13955 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATT 13992 |||||||| || || |||||||| || ||||| ||||| Sbjct 1744 CCTTCCAGAGAGATGTTTTCCATGAAGTCAAAAGGATT 1707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 480189846780600