Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq10749 82.4 6e-11 >seq10749 Length=40418 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 || || || ||||| || || ||||||||||| | || || | |||||||| || Sbjct 40078 TGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGC 40137 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 || || ||| |||| || || || ||||| ||| | ||||||||| || || | | Sbjct 40138 TTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCT-T 40196 Query 18243 TGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 || || || | ||| ||||||| |||||| || | ||||||| | ||||| || Sbjct 40197 GGCTTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCTGT 40256 Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325 || || || ||||| || ||||| Sbjct 40257 CAGGGTCTTCACAAAGATCTGCAT 40280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 377690978291025