Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq41976 111 1e-19 >seq41976 Length=14171 Score = 111 bits (122), Expect = 1e-19 Identities = 142/189 (75%), Gaps = 5/189 (3%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| |||||||| || | || ||||||||| || ||||| ||||| | || Sbjct 11740 CATATCTTTGTATTCTGCTCCAAAGTGCCGCCACTGGAAACCATACACTGGTCCCAAATC 11799 Query 25833 TCCATCTTCCCTG-TGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 || || || ||| | || ||| ||| |||||||| || || | || ||||| || | Sbjct 11800 CCCCTCCTCTCTGGTACTGAAA-CCCTGCTTATCCAGGAACTCACGTGATCCATTAGCAT 11858 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 25951 |||| |||||||| ||||| | ||||||||||| | ||||| || || || ||||| | Sbjct 11859 CCCAAATCTTTACACCCTTTGCAGAGAGCTCTTTAGCATTTGTAGAACC-CT-ACGAAAC 11916 Query 25952 ACAG-CAGC 25959 |||| |||| Sbjct 11917 ACAGACAGC 11925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338655423303285