Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq52800 104 2e-17 >seq52800 Length=5892 Score = 104 bits (114), Expect = 2e-17 Identities = 110/144 (76%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 21490 ATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCC 21549 || || |||| | || ||||| || | |||||||||||| || | || ||||||||||| Sbjct 511 ATTCATACCT-CGTCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCC 453 Query 21550 TCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGC 21609 ||| || || | |||||| ||||| ||||| | || |||||||| || || || || || Sbjct 452 TCTTTTCTTCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGC 393 Query 21610 AGCAAATGCAACTAATCGTTCACC 21633 ||||| || |||| ||||| || Sbjct 392 TGCAAAAGCTACTACACGTTCTCC 369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529523569105800