Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq10749 89.7 5e-13 seq15833 86.0 6e-12 >seq10749 Length=40418 Score = 89.7 bits (98), Expect = 5e-13 Identities = 102/136 (75%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | || ||||||||| | ||| | || || ||||| || |||||||| ||| Sbjct 40281 GCCACCTCTCAGACGCAGCACAAGATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 40340 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||||| || || ||||||||||| ||| |||| || | |||||| || || || Sbjct 40341 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCGGGGGG 40400 Query 131127 GAT-TCCTTCTTTGTC 131141 || |||| ||||| Sbjct 40401 AATGGACTTCCTTGTC 40416 >seq15833 Length=18383 Score = 86.0 bits (94), Expect = 6e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 145693 ATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTT 145752 |||||| ||||||||||| |||| || |||||||| || |||| |||||| | ||| || Sbjct 8340 ATTGCTGCATTTGATGGTCCCCAAGTTCTGCTGATTGCTCTTCCGGTTGCAAGAGTCTTT 8399 Query 145753 GTAGAGCATGTACGGTCCGCCAGTCTC 145779 ||| ||||||||||| ||| ||||| Sbjct 8400 GTACAGCATGTACGGCGTGCCGGTCTC 8426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 469903227292800