Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq10749 105 8e-18 >seq10749 Length=40418 Score = 105 bits (116), Expect = 8e-18 Identities = 107/138 (78%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | ||||| ||| ||||||| || ||||| ||||| |||||||||| Sbjct 40280 TGCCACCTCTCAGACGCAGCACAAGATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGG 40339 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || |||||| | || || ||||||||||| ||||| ||||| | |||||| |||| | Sbjct 40340 ACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCGGGGG 40399 Query 46485 GCACGCTC-TCCTTGTCC 46501 | | | | ||||||||| Sbjct 40400 GAATGGACTTCCTTGTCC 40417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562712172953400