Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq75740 196 6e-45 >seq75740 Length=3125 Score = 196 bits (216), Expect = 6e-45 Identities = 371/543 (68%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || |||||||| || || || | || ||||| ||||| || || || Sbjct 1075 GCACCATAAGCCACAGCCTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 1134 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 |||| | || || ||||| || ||||| || || || ||||| |||| ||||| Sbjct 1135 AAATCTTGCAGCAGTTTCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCACGATG 1194 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 || | | | |||||| |||| ||| | || || || | ||||| ||||| |||| Sbjct 1195 TCGTGGATCTGCGATTTGTCGAGCTTGGCATCCCGCAGGGCCTTTTCCACAGGATCCAGG 1254 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||| ||| ||| || ||||| || || | |||||||||||| ||| Sbjct 1255 GTGCCACGGAACAGGTCGGCGTTCAGCTCTTCAAAGCGAGCTCTGGTAATGGATGTGTAG 1314 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| || || || | |||||||||||||| | | || | | || || | Sbjct 1315 AAGTCAATACCCTCATAGAGAGAATCAATTTCAATACTGGCCTGCGTGCTAGACGACAGA 1374 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || |||||||| ||||| || || || || | || |||| || | | ||| || Sbjct 1375 GTGCGCTTTGCACGCTCGCAGGCAGTGCGGAGGCGGCGAACTGCTCTCTTGTTCTCGCTG 1434 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTCGAA 7456 || |||||||| || || || || || || | ||||| || || | | | | Sbjct 1435 ATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCGATGAAGTGGTTGACCATGCGGTT---G 1491 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||| ||||||||||| || || || || || | ||| || |||||||| || Sbjct 1492 TCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGCCA 1551 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||||| | | | || |||||||| || ||||| || |||||||| || || ||| Sbjct 1552 TCTTCAATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAAGATAAGAACG 1611 Query 7577 TTC 7579 ||| Sbjct 1612 TTC 1614 Score = 82.4 bits (90), Expect = 1e-10 Identities = 132/189 (70%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 7956 CAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGAC 8015 |||||||||| || | || ||||| || |||||||||||| || || ||||| || | Sbjct 2654 CAAAAACTGTATTGGTTGGATTCATTGCAACTTGGTTCTTCGCAGCATCGCCGATCAGCC 2713 Query 8016 GTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCG 8075 || || || || || |||||||| || || || || || || |||||||| | Sbjct 2714 TCTCCGTA---TCTGTGAAGGCGACGTAGCTCGGCGTGGTCCGGTTACCCTGGTCGTTGG 2770 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 |||| ||||| || ||| || | ||||| || || ||||| || || || | | Sbjct 2771 CAATGATTTCCACCTTCCCGTGCTGGAACACGCCAACACAGGAATAGGTGGTGCCGAGGT 2830 Query 8136 CAATACCGA 8144 |||| |||| Sbjct 2831 CAATTCCGA 2839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632294193037800