Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq323545 118 2e-21 seq304852 113 8e-20 >seq323545 Length=429 Score = 118 bits (130), Expect = 2e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 241430 AGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGAC 241489 || |||| |||||| | || || | | ||||| || ||| | ||||| | | Sbjct 214 AGCTGGGTGACCTGGGCGCGGAGGAGGTTGGCGGTGGCGGCCAGCTCGGCGTTCTGCCCC 155 Query 241490 TTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCAT 241549 |||||| ||||||| |||||||||| ||| |||||||| ||||| || ||||||||||| Sbjct 154 TTGAGCGCCTTCACCTTCTCCTCCAACCGGGCGATGCGCTCCAGCTTCCGCCGGCGGCAC 95 Query 241550 TTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCC 241609 |||| ||| || | ||||||||| || | ||| || ||||||| | || ||||| || Sbjct 94 TTGGAGGCGGCGATGCGGTTCCGCAGCCGCTTGCGCCCCGCCTTCAGCCGCCCCTGGCCC 35 Query 241610 TCC 241612 ||| Sbjct 34 TCC 32 >seq304852 Length=545 Score = 113 bits (124), Expect = 8e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 ||||||| ||| ||||| ||||| ||||| ||||| || | | ||||| || ||| Sbjct 452 AGGACCTTCTGCTTGAGCTGGGCGACCTGCTCCCGAAGCAGGCTGGCGGTGGAGGCCAGC 393 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | ||| || |||||| ||||||||||| || | ||| || ||||| Sbjct 392 TCCGTGTTCTGGCTCTTAAGGCTCTTCACCTTCTCCTCCAGGCGGGAGATCCGCTCCAGC 333 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 || | | |||||| |||| || || | ||||||| || | ||| | |||||||||| Sbjct 332 TTCCTCTTGCGGCACTTGGAAGCGGCGATTCGGTTCCTCAGCCGCTTTCTTTCCGCCTTG 273 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 || || ||||| ||||||||||| || || Sbjct 272 ATACGCTCCTGCGTGTCCATGTCGATGGGGGA 241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 927369488812800