Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_019704.1 Length=44375 Score E Sequences producing significant alignments: (Bits) Value seq329097 345 1e-90 seq329963 342 1e-89 >seq329097 Length=330 Score = 345 bits (382), Expect = 1e-90 Identities = 277/329 (84%), Gaps = 4/329 (1%) Strand=Plus/Minus Query 3987 GGTCGAATGGCAATTGACGGGCTGAAAGAGGTACAGGAGGCCGTCATGCTCATTGAGGCA 4046 ||||| ||||| || || || |||||||| || ||||| || || ||||| || || || Sbjct 329 GGTCGTATGGCCATCGATGGTCTGAAAGAAGTTCAGGAAGCGGTGATGCTGATAGAAGCC 270 Query 4047 GGTCTCAGCACGTATGAAAAAGAGTGCGCCAAACGCGGTGATGATTATCAGGAGATTTTT 4106 || || || || || || ||||||||||| ||||||||||| || |||||||| |||||| Sbjct 269 GGACTGAGTACCTACGAGAAAGAGTGCGCAAAACGCGGTGACGACTATCAGGAAATTTTT 210 Query 4107 GCCCAGCAGGTCCGGGAAACCATGGAGCGTCGTGCTGCGGGTCTGAAACCACCGGCATGG 4166 |||||||||||||| ||||| |||||||| ||||| || ||||| ||||| || || ||| Sbjct 209 GCCCAGCAGGTCCGTGAAACGATGGAGCGCCGTGCAGCCGGTCTTAAACCGCCCGCCTGG 150 Query 4167 GCCGCTGCAGCTTTTGAGGCCGGAGTGAAAAAATCAAACGAGGAGGAGCAAGA-TGGC-G 4224 || |||||||| ||||| |||| || | |||||| ||||||||| |||| || | | Sbjct 149 GCGGCTGCAGCATTTGAATCCGGGCTGCGACAATCAACAGAGGAGGAG-AAGAGTGACAG 91 Query 4225 CACGAGCTGCGTAATCTTCCGCATATTGCCAGTATGGCCTTTAATGAGCCGCTGATGCTT 4284 || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 90 CA-GAGCTGCGTAATCTCCCGCATATTGCCAGCATGGCCTTTAATGAGCCGCTGATGCTT 32 Query 4285 GAACCCGCCTATGCGCGGGTTTTCTTTTG 4313 | ||||||||||||||||||||||||||| Sbjct 31 GCACCCGCCTATGCGCGGGTTTTCTTTTG 3 >seq329963 Length=346 Score = 342 bits (378), Expect = 1e-89 Identities = 284/346 (82%), Gaps = 1/346 (0%) Strand=Plus/Minus Query 6593 TTCCGTTCCTTCAAGGCTGTTGAGAAGAAGCTGGATACGCGTCGTGGTTCTAACTCTGAG 6652 |||||||||||||| || || || ||||||||||||| |||||||| ||||| || ||| Sbjct 346 TTCCGTTCCTTCAAAGCCGTCAAGGAGAAGCTGGATACCCGTCGTGGCTCTAATTCCGAG 287 Query 6653 CTGGAAACTGCCGTGAAAGACCTGGGTATGGCTGTTTCATACAAGGGGATGTTTGGCGAT 6712 ||||| || || |||||||||||||| | || || || || |||||||||| ||||||| Sbjct 286 CTGGAGACAGCGGTGAAAGACCTGGGCAAAGCGGTGTCCTATAAGGGGATGTATGGCGAT 227 Query 6713 GTGGCCATCGTGGTGTACTCCGGCCAGTACGTCGAAAACGACGTCAAAAAGAATTATCTG 6772 ||||||||||| ||||| ||||| |||||||| ||||||| |||||||||||| | ||| Sbjct 226 GTGGCCATCGTCGTGTATTCCGGACAGTACGTGGAAAACGGCGTCAAAAAGAACTTCCTG 167 Query 6773 CCGGACCTGACAATGGTGCTGGGGAATACCCAGGCTCGTGGCCTGCGTACCTATGGCTGC 6832 |||||| || |||||||||||||| || ||||| || || ||||| |||||||||||| Sbjct 166 CCGGACAACACGATGGTGCTGGGGAACACTCAGGCACGCGGTCTGCGCACCTATGGCTGC 107 Query 6833 ATTCTTGATGCTGATGCCCAGCGCGAAGGTATCAATGCCTCGACACGCTACCCG-AAAAA 6891 |||| ||||| | || ||||||||||| || | ||||| | || |||||| ||| | Sbjct 106 ATTCAGGATGCGGCCGCACAGCGCGAAGGCATTCAGGCCTCTGCCCGTTACCCGCAAACA 47 Query 6892 CTGGGTGCAGTCGGGGGATCCGGCGCGCGAATTCACCATGATTCAG 6937 ||||||| | || ||||||||||| || ||||||||||||||| Sbjct 46 CTGGGTGACCACCGGCGATCCGGCGCGTGAGTTCACCATGATTCAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141276006038730