Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_019711.1 Length=47288 Score E Sequences producing significant alignments: (Bits) Value seq329300 603 3e-168 seq329963 598 1e-166 seq329097 590 2e-164 >seq329300 Length=337 Score = 603 bits (668), Expect = 3e-168 Identities = 336/337 (99%), Gaps = 0/337 (0%) Strand=Plus/Plus Query 26959 TAACCCACTGTTATTCATGTTGCATGGTGCACTGTTTATACCAACGATATAGTCTATTAA 27018 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TAACCCACTGTTATTCATGTTGCATGGTGCACTGTTTATACCAACGATATAGTCTATTAA 60 Query 27019 TGCATATATAGTATCGCCGAACGATTAGCTCTTCAGGCTTCTGAAGAAGCGTTTCAAGTA 27078 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TGCATAGATAGTATCGCCGAACGATTAGCTCTTCAGGCTTCTGAAGAAGCGTTTCAAGTA 120 Query 27079 CTAATAAGCCGATAGATAGCCACGGACTTCGTAGCCATTTTTCATAAGTGTTAACTTCCG 27138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CTAATAAGCCGATAGATAGCCACGGACTTCGTAGCCATTTTTCATAAGTGTTAACTTCCG 180 Query 27139 CTCCTCGCTCATAACAGACATTCACTACAGTTATGGCGGAAAGGTATGCATGCTGGGTGT 27198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CTCCTCGCTCATAACAGACATTCACTACAGTTATGGCGGAAAGGTATGCATGCTGGGTGT 240 Query 27199 GGGGAAGTCGTGAAAGAAAAGAAGTCAGCTGCGTCGTTTGACATCACTGCTATCTTCTTA 27258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GGGGAAGTCGTGAAAGAAAAGAAGTCAGCTGCGTCGTTTGACATCACTGCTATCTTCTTA 300 Query 27259 CTGGTTATGCAGGTCGTAGTGGGTGGCACACAAAGCT 27295 ||||||||||||||||||||||||||||||||||||| Sbjct 301 CTGGTTATGCAGGTCGTAGTGGGTGGCACACAAAGCT 337 >seq329963 Length=346 Score = 598 bits (662), Expect = 1e-166 Identities = 341/346 (99%), Gaps = 1/346 (0%) Strand=Plus/Minus Query 6566 TTCCGTTCCTTCAAAGCCGTCAAGGAGAAGCTGGATACCCGTCGTGGCTCTAATTCCGAG 6625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 346 TTCCGTTCCTTCAAAGCCGTCAAGGAGAAGCTGGATACCCGTCGTGGCTCTAATTCCGAG 287 Query 6626 CTGGAGACAGCGGTGAAAGACCTGGGCAAAGCGGTGTCCTATAAGGGGATGTATGGCGAT 6685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 286 CTGGAGACAGCGGTGAAAGACCTGGGCAAAGCGGTGTCCTATAAGGGGATGTATGGCGAT 227 Query 6686 GTGGCCATCGTCGTGTATTCCGGACAGTACGTGGAAAACGGCGTCAAAAAGAACTTCCTG 6745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 226 GTGGCCATCGTCGTGTATTCCGGACAGTACGTGGAAAACGGCGTCAAAAAGAACTTCCTG 167 Query 6746 CCGGACAACACGATGGTGCTGGGGAACACTCAGGCACGCGGTCTGCGCACCTATGGCTGC 6805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 166 CCGGACAACACGATGGTGCTGGGGAACACTCAGGCACGCGGTCTGCGCACCTATGGCTGC 107 Query 6806 ATTCAGGATGCGGACGCACAGCGCGAAGGCATTAACGCCTCTGCCCGTTACCCG-AAAAA 6864 ||||||||||||| ||||||||||||||||||| | |||||||||||||||||| ||| | Sbjct 106 ATTCAGGATGCGGCCGCACAGCGCGAAGGCATTCAGGCCTCTGCCCGTTACCCGCAAACA 47 Query 6865 CTGGGTGACCACCGGCGATCCGGCGCGTGAGTTCACCATGATTCAG 6910 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 46 CTGGGTGACCACCGGCGATCCGGCGCGTGAGTTCACCATGATTCAG 1 >seq329097 Length=330 Score = 590 bits (654), Expect = 2e-164 Identities = 329/330 (99%), Gaps = 0/330 (0%) Strand=Plus/Minus Query 3995 CGGTCGTATGGCCATCGATGGTCTGAAAGAAGTTCAGGAAGCGGTGATGCTGATAGAAGC 4054 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 330 CGGTCGTATGGCCATCGATGGTCTGAAAGAAGTTCAGGAAGCGGTGATGCTGATAGAAGC 271 Query 4055 CGGACTGAGTACCTACGAGAAAGAGTGCGCAAAACGCGGTGACGACTATCAGGAAATTTT 4114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 270 CGGACTGAGTACCTACGAGAAAGAGTGCGCAAAACGCGGTGACGACTATCAGGAAATTTT 211 Query 4115 TGCCCAGCAGGTCCGTGAAACGATGGAGCGCCGTGCAGCCGGTCTTAAACCGCCCGCCTG 4174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 210 TGCCCAGCAGGTCCGTGAAACGATGGAGCGCCGTGCAGCCGGTCTTAAACCGCCCGCCTG 151 Query 4175 GGCGGCTGCAGCATTTGAATCCGGGCTGCGACAATCAACAGAGGAGGAGAAGAGTGACAG 4234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 150 GGCGGCTGCAGCATTTGAATCCGGGCTGCGACAATCAACAGAGGAGGAGAAGAGTGACAG 91 Query 4235 CAGAGCTGCGTAATCTCCCGCATATTGCCAGCATGGCCTTTAATGAGCCGCTGATGCTTG 4294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 90 CAGAGCTGCGTAATCTCCCGCATATTGCCAGCATGGCCTTTAATGAGCCGCTGATGCTTG 31 Query 4295 AACCCGCCTATGCGCGGGTTTTCTTTTGTG 4324 ||||||||||||||||||||||||||||| Sbjct 30 CACCCGCCTATGCGCGGGTTTTCTTTTGTG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150558027952500