Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value seq329097 340 5e-89 seq329963 309 9e-80 >seq329097 Length=330 Score = 340 bits (376), Expect = 5e-89 Identities = 277/331 (84%), Gaps = 4/331 (1%) Strand=Plus/Minus Query 3987 GGCCGCATGGCTATTGACGGGCTGAAAGAGGTACAGGAAGCCGTCATGCTCATCGAGGCT 4046 || || ||||| || || || |||||||| || |||||||| || ||||| || || || Sbjct 329 GGTCGTATGGCCATCGATGGTCTGAAAGAAGTTCAGGAAGCGGTGATGCTGATAGAAGCC 270 Query 4047 GGTCTCAGTACGTATGAGAAAGAATGCGCCAAACGCGGTGATGATTATCAGGAGATTTTT 4106 || || ||||| || |||||||| ||||| ||||||||||| || |||||||| |||||| Sbjct 269 GGACTGAGTACCTACGAGAAAGAGTGCGCAAAACGCGGTGACGACTATCAGGAAATTTTT 210 Query 4107 GCCCAGCAGGTCCGGGAAACAATGGAGCGTCGTGCTGCGGGTCTGAAACCACCGGCATGG 4166 |||||||||||||| ||||| |||||||| ||||| || ||||| ||||| || || ||| Sbjct 209 GCCCAGCAGGTCCGTGAAACGATGGAGCGCCGTGCAGCCGGTCTTAAACCGCCCGCCTGG 150 Query 4167 GCCGCTGCCGCTTTTGAGGCTGGACTGAAAAAATCAAACGAGGAGGAGCAAGA-TGGC-G 4224 || ||||| || ||||| | || ||| | |||||| ||||||||| |||| || | | Sbjct 149 GCGGCTGCAGCATTTGAATCCGGGCTGCGACAATCAACAGAGGAGGAG-AAGAGTGACAG 91 Query 4225 CACGAGCTGCGTAATCTTCCGCATATCGCCAGTATGGCCTTTAATGAGCCGCTGATGCTT 4284 || |||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||| Sbjct 90 CA-GAGCTGCGTAATCTCCCGCATATTGCCAGCATGGCCTTTAATGAGCCGCTGATGCTT 32 Query 4285 GAACCCGCCTACGCGCGGGTTTTCTTTTGTG 4315 | ||||||||| ||||||||||||||||||| Sbjct 31 GCACCCGCCTATGCGCGGGTTTTCTTTTGTG 1 >seq329963 Length=346 Score = 309 bits (342), Expect = 9e-80 Identities = 277/346 (80%), Gaps = 1/346 (0%) Strand=Plus/Minus Query 6593 TTCCGTTCCTTCAAGTCTGTTGAGAAGAAACTGGACACCCGTCGGGGTTCTAACTCAGAG 6652 |||||||||||||| | || || |||| ||||| |||||||| || ||||| || ||| Sbjct 346 TTCCGTTCCTTCAAAGCCGTCAAGGAGAAGCTGGATACCCGTCGTGGCTCTAATTCCGAG 287 Query 6653 CTGGAAACTGCCGTGAAAGACCTGGGTATGGCTGTTTCATACAAGGGTATGTATGGCGAT 6712 ||||| || || |||||||||||||| | || || || || ||||| |||||||||||| Sbjct 286 CTGGAGACAGCGGTGAAAGACCTGGGCAAAGCGGTGTCCTATAAGGGGATGTATGGCGAT 227 Query 6713 GTGGCCATCGTGGTGTACTCCGGCCAGTACGTCGAAAATGATGTCAAAAAGAACTATCTG 6772 ||||||||||| ||||| ||||| |||||||| ||||| | ||||||||||||| ||| Sbjct 226 GTGGCCATCGTCGTGTATTCCGGACAGTACGTGGAAAACGGCGTCAAAAAGAACTTCCTG 167 Query 6773 CCGGATCTGACGATGGTTCTGGGTAATACACAGGCCCGTGGCCTCCGTACCTATGGCTGC 6832 ||||| |||||||| ||||| || || ||||| || || || || |||||||||||| Sbjct 166 CCGGACAACACGATGGTGCTGGGGAACACTCAGGCACGCGGTCTGCGCACCTATGGCTGC 107 Query 6833 ATTCTTGATGCTGATGCCCAGCGCGAAGGTATCAATGCCTCGACACGCTACCCG-AAAAA 6891 |||| ||||| | || ||||||||||| || | ||||| | || |||||| ||| | Sbjct 106 ATTCAGGATGCGGCCGCACAGCGCGAAGGCATTCAGGCCTCTGCCCGTTACCCGCAAACA 47 Query 6892 CTGGGTGCAGTCGGGGGATCCGGCGCGCGAATTCACCATGATTCAG 6937 ||||||| | || ||||||||||| || ||||||||||||||| Sbjct 46 CTGGGTGACCACCGGCGATCCGGCGCGTGAGTTCACCATGATTCAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144433741609120