Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq10749 167 3e-36 >seq10749 Length=40418 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || |||||||| || || || ||||||||| | || Sbjct 40280 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 40221 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || |||| || || || ||||||||||| || ||||| || || ||| Sbjct 40220 GACACCATTGAGAACGTGAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 40161 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || |||||||| ||||| || || |||| || ||||| | ||||| || Sbjct 40160 CAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 40101 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||||||||| || ||||| || |||| || | ||||| Sbjct 40100 ATCCAGAAGGAATCCACCCTGCATCTTGTGCTGCGCCTGAGGGGTGG 40054 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/137 (75%), Gaps = 1/137 (1%) Strand=Plus/Minus Query 27497 AGGACAAGGAGGGA-ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTC 27555 |||||||||| | ||||| || || |||||| | | || || ||||| ||||| || Sbjct 40418 AGGACAAGGAAGTCCATTCCCCCCGATCAGCAGAGGTTGATCTTCGCTGGCAAGCAGCTG 40359 Query 27556 GAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 || |||| || ||||| | ||||| || |||| |||||||||||||| ||||| || Sbjct 40358 GAAGATGGGCGCACCCTGTCCGACTACAACATCCAGAAGGAATCCACTCTGCATCTTGTG 40299 Query 27616 TTGCGTCTTCGCGGTGG 27632 ||||||| | ||||| Sbjct 40298 CTGCGTCTGAGAGGTGG 40282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567761504600400