Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq10749 131 1e-25 >seq10749 Length=40418 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | || ||| || || || ||| ||||| ||||||||||| || | Sbjct 40054 CCACCCCTCAGGCGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAC 40113 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || |||||||||||||| |||||||||| | ||||||||| | || Sbjct 40114 AGGGTGCGGCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 40173 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | |||||||| ||| ||||| |||| | |||| | |||||||| || || || Sbjct 40174 ATGCCTTCCTTGTCCTGGATCTT-GGCTTTCACGTTCTCAATGGTGTCACTGGGCTCAAC 40232 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| | || || ||||| || || ||||||||||| ||||| |||||| Sbjct 40233 CTCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATG 40281 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | || ||| || || || ||| ||||| ||||||||||| || Sbjct 40278 CATGCCACCTCTCAGACGCAGCACAAGATGCAGAGTGGATTCCTTCTGGATGTTGTAGTC 40337 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || || |||| | || ||||||||||| || || |||||||| | ||||||||| Sbjct 40338 GGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATC 40394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358421713145265