Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10]
357,545 sequences; 1,265,634,512 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq10749 145 2e-29
seq302859 86.0 2e-11
>seq10749
Length=40418
Score = 145 bits (160), Expect = 2e-29
Identities = 158/208 (76%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || || ||||| || || |||||||||||||| || || |||
Sbjct 40277 CAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTTGA--GCCCAGTG 40220
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| |||||||| ||| ||||| |||||||| ||||| || || || || ||||
Sbjct 40219 ACACCATTGAGAACGTGAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAGC 40160
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| || || || ||||| |||||||| | || || | || || |||
Sbjct 40159 AGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAACA 40100
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || ||||| || |||||||||||
Sbjct 40099 TCCAGAAGGAATCCACCCTGCATCTTGT 40072
>seq302859
Length=447
Score = 86.0 bits (94), Expect = 2e-11
Identities = 82/103 (80%), Gaps = 4/103 (4%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981
|| || |||||||| || || || || ||||| |||||||| |||||||| || || |
Sbjct 402 CAGATCTTCGTGAAGACGCTGACGGGCAAAACCATCACCCTGGAGGTGGA--GCCCAACG 345
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024
|||| |||||||||||||| ||||| ||||| ||||||||
Sbjct 344 ACACGATCGAGAACGTCAAGGCCAAGATCCAGGATAAAGAAGG 302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1198216852828730
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |