Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq41731 125 7e-24 seq43919 102 8e-17 >seq41731 Length=36803 Score = 125 bits (138), Expect = 7e-24 Identities = 108/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || |||||||| || ||||| |||||||| || | ||| ||||| ||||| | ||| || Sbjct 33848 TCATCTCTACTGATGAGTTCGTTAGAAAAAGTGAGTCCAGGCATTAATCCCCTTTTCTTC 33907 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | |||||| || | ||||| || ||||||||||| ||||| ||||| |||||||| ||| Sbjct 33908 AGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCT 33967 Query 11774 ACTACTCTTTCTCC 11787 ||||| | |||||| Sbjct 33968 ACTACACGTTCTCC 33981 >seq43919 Length=14035 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || ||||| || || |||||||| || || || | ||| ||||||| || | || || Sbjct 8021 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 8080 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | |||||||||||||||||| ||||| |||||||| || || || || || ||||| || Sbjct 8081 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAAGCA 8140 Query 11774 ACTACTCTTTCTCC 11787 || ||||| || || Sbjct 8141 ACCACTCTCTCACC 8154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468226671813200