Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1439 91.5 1e-13 >seq1439 Length=3833 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| || | |||||| ||||| ||||| || ||||||||||||| || ||| | || Sbjct 290 CAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATC 231 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| || | || |||| ||| || || || | ||| || ||||| Sbjct 230 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTC 171 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || ||| || | | | ||||| | |||||| || | |||||| Sbjct 170 CTGGATCTTGGC--CTTTACATTCTCGATGGTGTCACTGGGCTCAACCTCAAGAGTGATG 113 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || || |||||||| || || ||||| ||||||||||| Sbjct 112 GTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTT 75 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404836681505950