Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq23309 96.9 3e-15 >seq23309 Length=21015 Score = 96.9 bits (106), Expect = 3e-15 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || ||||| |||| ||| ||||| | || |||||||||||||| || ||||| Sbjct 15288 AGCCCTGTGACATGGGCAATCATGTAAGTGAGCAGTGAATAGCTGGCAATATTGAAAGGC 15347 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 ||||| | ||||| ||||| ||||||||||| || || || || | ||||||| Sbjct 15348 ACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCGTTTAGA 15407 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCA 20399 ||||| || || || | || || || || || ||||||| Sbjct 15408 ACATAGAACTGGCAAAGGGCATGGCATGGAGGCAGAGCCATCA 15450 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 20534 GCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCT-GTG 20592 || ||||||||||||||||||||||| ||||| |||||||||||||||||| ||| ||| Sbjct 18939 GCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCTCTGGTG 18998 Query 20593 CGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCC 20652 | | || || |||||||||| | || ||||| ||||| ||||| || || Sbjct 18999 C-TGAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAATCTTCACACC 19057 Query 20653 TGTTCTTGAAAGCTC 20667 | || || ||||| Sbjct 19058 TTTTGCAGAGAGCTC 19072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441091948970200