Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq30332 95.1 5e-14 seq9068 87.8 7e-12 seq10816 84.2 9e-11 >seq30332 Length=11874 Score = 95.1 bits (104), Expect = 5e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||||| |||| || | ||||| || || ||||||||||| | || || || || || Sbjct 10757 GTTACTAATGCTGTGGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACA 10698 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| ||||| || | || || || |||||||| ||||| || ||||| Sbjct 10697 AAAGATGCTGGAACCATTGCAGGGCTCAACGTACTGCGAATTATCAATGAGCCGACAGCT 10638 Query 451433 GCTGCTCTAGCATATGGACT 451452 ||||| |||| ||||| || Sbjct 10637 GCTGCGATAGCCTATGGTCT 10618 Score = 86.0 bits (94), Expect = 2e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 450920 GGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAGAA 450979 |||||||||||||| ||||||| ||| ||||| ||||| | |||| |||| || || ||| Sbjct 11770 GGAATTGATCTTGGTACCACCTATTCCTGTGTTGGTGTATTCCAACATGGGAAGGTGGAA 11711 Query 450980 ATTATAGCAAATGACCAAGG 450999 ||||| || |||||||| || Sbjct 11710 ATTATTGCCAATGACCAGGG 11691 >seq9068 Length=2336 Score = 87.8 bits (96), Expect = 7e-12 Identities = 274/419 (65%), Gaps = 9/419 (2%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || |||||| | | ||||| | || || ||||| | || || || || || || Sbjct 2043 GGCAAGCCCAAGGTGCAAGTGGAGTACAAGGGTGAGATGAAGACCTTCTTCCCAGAGGAG 1984 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || ||||| ||||| || ||||| || | || || ||| | || | | | Sbjct 1983 ATCAGCTCCATGGTCCTTACCAAGATGAAGGAGATCGCTGAGGCCTATCTGGGG-CGCAA 1925 Query 451313 GTTACTGA-TGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 | | | || ||| || || || || || || || |||||||| | || || || || || Sbjct 1924 GGTGCAGAATGCTGTCATCACAGTGCCTGCCTACTTCAATGACTCCCAGCGCCAGGCCAC 1865 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 ||||| || || || |||| | ||||| | || ||||| || || || ||||| Sbjct 1864 CAAAGACGCTGGCACCATCACTGGCCTTAATGTGATGCGCATTATCAACGAGCCCACAGC 1805 Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAA-----ACAGAAGaaaaaaaTATT 451486 ||||||| |||| ||||| || ||| || ||| | | | | ||| || ||| | Sbjct 1804 AGCTGCTATAGCCTATGG-CTTGGACAA-GAAAGGTACCCGGGCCGGAGAGAAGAATGTG 1747 Query 451487 TTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGG 451546 | | ||||| || || || || ||| |||| || | ||| | ||||| ||||| Sbjct 1746 CTCATCTTTGACTTGGGAGGGGGCACTTTTGATGTATCCATCCTTACCATTGAGGATGGC 1687 Query 451547 GTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 | ||||| || ||| | || |||||| || || || || || || || |||| || Sbjct 1686 ATCTTTGAGGTGAAGTCCACAGCTGGTGACACCCACCTGGGTGGGGAGGACTTTGACAA 1628 >seq10816 Length=7005 Score = 84.2 bits (92), Expect = 9e-11 Identities = 83/107 (78%), Gaps = 3/107 (3%) Strand=Plus/Plus Query 451190 AAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAA---ACTAAAACTTTTGCTCCT 451246 |||| |||||| |||||||||| || | ||||| | || ||||| ||||||||| Sbjct 551 AAAGCCAAGCCCCATATTCAAGTTGATGTTGGAGGTGGACAGACAAAAACATTTGCTCCT 610 Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGA 451293 ||||||||||| ||||||| || || || ||||| ||||| || || Sbjct 611 GAAGAAATTTCTGCTATGGTCCTGACAAAGATGAAGGAAACTGCTGA 657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974429796327740