Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq15324 141 7e-28 seq30332 114 1e-19 seq18836 93.3 3e-13 >seq15324 Length=2797 Score = 141 bits (156), Expect = 7e-28 Identities = 305/452 (67%), Gaps = 8/452 (2%) Strand=Plus/Minus Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910 ||||||| || || |||||||||||| |||||| || || || | | ||||| || | Sbjct 932 AATCAATACCCTCATACAAAGAATCAATTTCAATGGTGGTCTGGGCAGTGGAAGAAAGGG 873 Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTGATTC 517969 | || || | ||||| | |||||| ||||| | |||| ||| ||| | | | Sbjct 872 TCCTCTTCGCCCTCTCACAAGATGTCCTCAGTCTCC-TAAGAGCTCTTGGGTTTCCACTG 814 Query 517970 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 518029 | ||| | || | || ||||| || || | | | | || | | || ||| Sbjct 813 ATATCCTTCTTGTTCTTCCTCTTAAACTCCTGGGTAAAGTGGTTCACCATTCTGTTGTCA 754 Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 518089 ||||||||||| || | | ||| | ||| | || ||| | || | || | || ||| Sbjct 753 AAATCTTCACCACCAAGATGAGTGTCTCCAGCTGTGGCTTTCACCTCAAAGATACCCTCT 694 Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149 |||| | | || | |||||| ||| |||||||| | |||||| ||||| |||||| Sbjct 693 TCAATGGTAAGGAGGGAAACATCAAAGGTACCACCACCGAGATCAAAGATAAGCACATTC 634 Query 518150 ATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 | || | |||| | || |||||||| || |||| |||||||||||| || Sbjct 633 TTCTCACCAACACTGGTAGCCTTCTTGTCAAGACCGTAGGCAATAGCAGCAGCAGTAGGC 574 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 ||||| ||||| | || ||||| ||||||||||| || ||||| || || ||||| Sbjct 573 TCATTGATAATACGCATGACATTGAGACCAGCAATGACACCGGCATCCTTGGTAGCTTGA 514 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295 | || |||||||| || || || || || || Sbjct 513 CGCTGAGAATCGTTGAAGTAAGCTGGGACTGT 482 Score = 120 bits (132), Expect = 2e-21 Identities = 266/395 (67%), Gaps = 8/395 (2%) Strand=Plus/Minus Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910 ||||||| || || |||||||||||| |||||| || || || | | ||||| || | Sbjct 397 AATCAATACCCTCATACAAAGAATCAATTTCAATGGTGGTCTGGGCAGTGGAAGAAAGGG 338 Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTGATTC 517969 | || || | ||||| | |||||| ||||| | |||| ||| ||| | | | Sbjct 337 TCCTCTTCGCCCTCTCACAAGATGTCCTCAGTCTCC-TAAGAGCTCTTGGGTTTCCACTG 279 Query 517970 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 518029 | ||| | || | || ||||| || || | | | | || | | || ||| Sbjct 278 ATATCCTTCTTGTTCTTCCTCTTAAACTCCTGGGTAAAGTGGTTCACCATTCTGTTGTCA 219 Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 518089 ||||||||||| || | | ||| | ||| | || ||| | || | || | || ||| Sbjct 218 AAATCTTCACCACCAAGATGAGTGTCTCCAGCTGTGGCTTTCACCTCAAAGATACCCTCT 159 Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149 |||| | | || | |||||| ||| |||||||| | |||||| ||||| |||||| Sbjct 158 TCAATGGTAAGGAGGGAAACATCAAAGGTACCACCACCGAGATCAAAGATAAGCACATTC 99 Query 518150 ATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 | || | |||| | || |||||||| || |||| |||||||||||| || Sbjct 98 TTCTCACCAACACTGGTAGCCTTCTTGTCAAGACCGTAGGCAATAGCAGCAGCAGTAGGC 39 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAAT 518238 ||||| ||||| | || ||||| ||||||||||| Sbjct 38 TCATTGATAATACGCATGACATTGAGACCAGCAAT 4 >seq30332 Length=11874 Score = 114 bits (126), Expect = 1e-19 Identities = 362/554 (65%), Gaps = 18/554 (3%) Strand=Plus/Plus Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 |||||||| || ||||||||||||||||| | | | || || | ||| |||||||| Sbjct 9954 GCACCATAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 10013 Query 517670 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728 || | || |||| ||| | ||| || ||||||| || || ||||| | || || Sbjct 10014 AAGTCCTGCAGCAGTT-TCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCACGAT 10072 Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788 ||||| | ||| ||||| || ||||| | |||| | | ||||| || || || || Sbjct 10073 GTCATGGATCTGCGATTTGTCGAGTTTGGCATCCCGCAGGGCCTTTTCCACAGGATCCAG 10132 Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA--GA-GTGAC 517845 | | | |||| ||| | | || ||||| || |||||| |||| || ||| Sbjct 10133 AGTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATGGATGTG-- 10190 Query 517846 ATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAG 517904 || || ||||| || || | | |||||||| ||| || | | || || ||||| Sbjct 10191 --TAGAAGTCAATACCCTCATAGAGAGAATCAATTTCGATACTGGCCTGCGTGCTAGAAG 10248 Query 517905 ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG----CTTTTGCT 517960 | || | ||| || ||||| || ||||| || | || | || | | ||| | || Sbjct 10249 ACAGAGTACGCTTTGCACGCTCGCATGCGGTGCGGAGGCGACGAACTGCTCTCTTGTTCT 10308 Query 517961 GATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA 518020 |||| ||| | || | || | |||||| || ||| | | | || | Sbjct 10309 CGCTGAT----GTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATAAAGTGGTTGACCATG 10364 Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080 || || ||||| ||||| || ||||| | ||| | |||| || | | | || | || Sbjct 10365 CGGTTGTCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAG 10424 Query 518081 AGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140 | |||||||||| | || || | |||||| ||| ||||| || | || || ||| Sbjct 10425 ATGCCATCTTCAATGGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCGAAGATA 10484 Query 518141 AGTACATTCATTTC 518154 || |||||| |||| Sbjct 10485 AGAACATTCCTTTC 10498 Score = 113 bits (124), Expect = 3e-19 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||||| |||||||||||||| |||||| |||| | || || ||||| || |||| Sbjct 11587 CAAAAACCGTATTGGTTGGATTCATTGCAACTTGGTTCTTCGCAGCATCGCCGATCAACC 11646 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 || || ||||| || | ||| || ||| || || || ||||| || ||||| |||| Sbjct 11647 TCTCCGTATCTGTGAAGGCAACGTAGCTTGGCGTGGTCCGGTTACCCTGGTCATTGGCAA 11706 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 ||||||| || || |||| ||| ||||||| ||||| | | || || || | ||||| Sbjct 11707 TAATTTCCACCTTCCCATGTTGGAATACACCAACACAGGAATAGGTGGTACCAAGATCAA 11766 Query 518703 TACCAATAGC 518712 | || | ||| Sbjct 11767 TTCCGACAGC 11776 >seq18836 Length=48291 Score = 93.3 bits (102), Expect = 3e-13 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 366993 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 367052 ||| || || ||| | ||||| || ||||| || |||||| | ||| | | | ||||| Sbjct 26148 TGTTGTGGCTACAGTGGCATTCGGAATGGGCATCAATAAAGCAGATATCCGGATGGTTAT 26207 Query 367053 TCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 367112 |||||| || || || ||| | || ||| ||||||||||||||||| ||||| ||||| Sbjct 26208 TCATTACGGTGCCCCTAAGGAAATGGAATCCTATTATCAAGAAATTGGGAGAGCTGGTCG 26267 Query 367113 TGATGG 367118 ||| || Sbjct 26268 TGACGG 26273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3778296326218930