Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq15324 228 1e-54 seq30332 201 1e-46 seq10816 93.3 5e-14 >seq15324 Length=2797 Score = 228 bits (252), Expect = 1e-54 Identities = 347/492 (71%), Gaps = 8/492 (2%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| || | |||||||| |||| | |||||||||| || || || || ||| Sbjct 969 AGCTCCTCGAATCTGGCACGGGTGATGGTGGAGTAGAAATCAATACCCTCATACAAAGAA 910 Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363 |||||||||||||| || || || || ||||| | || | ||| || | |||||| | Sbjct 909 TCAATTTCAATGGTGGTCTGGGCAGTGGAAGAAAGGGTCCTCTTCGCCCTCTCACAAGAT 850 Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423 || | | | | ||| || | ||||| || ||||| ||||| | || | ||| Sbjct 849 GTCCTCAGTCTCCTAAGAGCTCTTGGGTTTCCACTGATATCCTTCTTGTTCTTCCTCTTA 790 Query 7424 AACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTA 7483 ||||| | | ||||| | | ||| || |||||||||||||| | || || Sbjct 789 AACTCCTGGGTAAAGTGGTTCACCATTCTGTTGTCAAAATCTTCACCACCAAGATGAGTG 730 Query 7484 TCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCA 7543 || || || || ||||| || ||||||||||| |||||||| | | | ||||||||| Sbjct 729 TCTCCAGCTGTGGCTTTCACCTCAAAGATACCCTCTTCAATGGTAAGGAGGGAAACATCA 670 Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------TTC 7597 || ||||||||||| || ||||| || || || ||| | || | | || ||| Sbjct 669 AAGGTACCACCACCGAGATCAAAGATAAGCACATTCTTCTCACCAACACTGGTAGCCTTC 610 Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACAGTT 7656 || || |||||||| || ||||| || || || || ||||| |||||||| | |||| || Sbjct 609 TTGTCAAGACCGTAGGCAATAGCAGCAGCAGTAGGCTCATTGATAATACGCATGACA-TT 551 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 || |||||||| | ||||| || || ||||| || || |||||||| ||||| || Sbjct 550 GAGACCAGCAATGACACCGGCATCCTTGGTAGCTTGACGCTGAGAATCGTTGAAGTAAGC 491 Query 7717 CGGGACCGTTAC 7728 ||||| || || Sbjct 490 TGGGACTGTGAC 479 Score = 194 bits (214), Expect = 2e-44 Identities = 369/541 (68%), Gaps = 2/541 (0%) Strand=Plus/Minus Query 6524 TAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTACTTTTCATCTTCATCTTTA 6583 ||||| || | | ||||||| | ||||||||| ||| || | || || ||| || Sbjct 2197 TAGTTCTCCAAAGCATTCTTTGACTCGACCTTCTTCTTGTGTTCCTCGTCCTCAGACTTG 2138 Query 6584 TACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCA 6643 ||||| || || || ||||||||||| || || || || || || || || ||||| ||| Sbjct 2137 TACTTCTCAGCCTCCTGGACCATCTTCTCGATCTCATCCTTGGACAACCTACCCTTGTCA 2078 Query 6644 TTCGTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAA 6702 || || || || ||||| ||| | | || | || ||| || ||||| |||||||| Sbjct 2077 TTGGTGATTGTGATCTTGTTCTTCTGT-CCGGTGGTCTTGTCCTCAGCTGAGACATTCAA 2019 Query 6703 AATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGC 6762 |||||||| ||||||| ||||| | || | || || || ||| || || || | Sbjct 2018 GATACCATTGGCATCAATGTCGAAGCAGACTGTGATCTGGGGAACACCTCTGGGAGCAGG 1959 Query 6763 TGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTC 6822 ||| || || | | |||||| |||| | || |||||||| | | | | | | || Sbjct 1958 TGGGATTCCTGAAAGCTCAAATTTACCCAACAAGTTGTTATCCCTGGTCCTGGTTCTCTC 1899 Query 6823 ACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTG 6882 ||| || || |||| || ||| | ||||| || || || ||||||| ||| Sbjct 1898 ACCCTCGTACACTTGGATCAACACACCGGGTTGGTTGTCAGAGTATGTAGAGAAGACTTG 1839 Query 6883 TTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCAT 6942 || ||||| | || || || || || || || || | ||||| | ||| || Sbjct 1838 CTCCTTCTTGGTGGGGATGGTGGTGTTCCTTGGGATCAAGACAGTCATGACACCTCCAGC 1779 Query 6943 AGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTC 7002 ||| || || ||||| || || || || || |||||||| || || || ||||| || Sbjct 1778 AGTCTCAAGACCAAGGGAAAGGGGAGTAACATCCAAGAGCAATAGATCCTGAACCTTCTC 1719 Query 7003 GTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATC 7062 || || ||||| | ||||| || |||||||| | || || ||||| || |||||||| Sbjct 1718 ATTACCCTCACCACTCAAGATAGCAGCTTGGACAGCAGCACCATATGCAACAGCCTCATC 1659 Query 7063 G 7063 | Sbjct 1658 G 1658 Score = 192 bits (212), Expect = 7e-44 Identities = 294/417 (71%), Gaps = 8/417 (2%) Strand=Plus/Minus Query 7259 GCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTT 7318 |||||||| |||| | |||||||||| || || || || ||||||||||||||||| Sbjct 419 GCACGGGTGATGGTGGAGTAGAAATCAATACCCTCATACAAAGAATCAATTTCAATGGTG 360 Query 7319 GTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378 || || || || ||||| | || | ||| || | |||||| | || | | | | | Sbjct 359 GTCTGGGCAGTGGAAGAAAGGGTCCTCTTCGCCCTCTCACAAGATGTCCTCAGTCTCCTA 300 Query 7379 AGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAG 7438 || || | ||||| || ||||| ||||| | || | |||||||| | | ||| Sbjct 299 AGAGCTCTTGGGTTTCCACTGATATCCTTCTTGTTCTTCCTCTTAAACTCCTGGGTAAAG 240 Query 7439 TGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCT 7498 || | | ||| || |||||||||||||| | || || || || || || ||| Sbjct 239 TGGTTCACCATTCTGTTGTCAAAATCTTCACCACCAAGATGAGTGTCTCCAGCTGTGGCT 180 Query 7499 TTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCC 7558 || || ||||||||||| |||||||| | | | ||||||||||| ||||||||||| Sbjct 179 TTCACCTCAAAGATACCCTCTTCAATGGTAAGGAGGGAAACATCAAAGGTACCACCACCG 120 Query 7559 AGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------TTCTTATCGAGACCGTAC 7612 || ||||| || || || ||| | || | | || ||||| || |||||||| Sbjct 119 AGATCAAAGATAAGCACATTCTTCTCACCAACACTGGTAGCCTTCTTGTCAAGACCGTAG 60 Query 7613 GCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAAT 7668 || ||||| || || || || ||||| |||||||| | |||| || || |||||||| Sbjct 59 GCAATAGCAGCAGCAGTAGGCTCATTGATAATACGCATGACA-TTGAGACCAGCAAT 4 Score = 105 bits (116), Expect = 8e-18 Identities = 143/197 (73%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 6524 TAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTACTTTTCATCTTCATCTTTA 6583 |||||||| | | ||||||| | ||| ||||| || || || || || || || Sbjct 2736 TAGTTTTCCAAAGCATTCTTGGACTCTACCTTCTTTTTGTGCTCCTCGTCCTCGGACTTG 2677 Query 6584 TACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCA 6643 ||||| || || || ||||||||||| || || || || || || || || ||||| ||| Sbjct 2676 TACTTCTCAGCCTCCTGGACCATCTTCTCGATCTCATCCTTGGACAACCTACCCTTGTCA 2617 Query 6644 TTCGTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAA 6702 || || || |||||||| ||| | | || | || ||| || ||||| |||||||| Sbjct 2616 TTGGTGATTGTAATCTTGTTCTTCTGT-CCGGTGGTCTTGTCCTCAGCTGAGACATTCAA 2558 Query 6703 AATACCATTTGCATCAA 6719 |||||||| ||||||| Sbjct 2557 GATACCATTGGCATCAA 2541 >seq30332 Length=11874 Score = 201 bits (222), Expect = 1e-46 Identities = 372/543 (69%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || ||||| || || || | || ||||| ||||| || || || Sbjct 9954 GCACCATAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 10013 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | ||| | || || ||||| || ||||| || || || ||||| |||| ||||| Sbjct 10014 AAGTCCTGCAGCAGTTTCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCACGATG 10073 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | |||||| |||| || | || || || | ||||| ||||| |||| | Sbjct 10074 TCATGGATCTGCGATTTGTCGAGTTTGGCATCCCGCAGGGCCTTTTCCACAGGATCCAGA 10133 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||| ||| | ||| || ||||| || || | |||||||||||| ||| Sbjct 10134 GTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATGGATGTGTAG 10193 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| || || || | ||||||||||| || | | || | | ||||| | Sbjct 10194 AAGTCAATACCCTCATAGAGAGAATCAATTTCGATACTGGCCTGCGTGCTAGAAGACAGA 10253 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || |||||||| ||||| || || || || | ||||||| || | | ||| || Sbjct 10254 GTACGCTTTGCACGCTCGCATGCGGTGCGGAGGCGACGAACTGCTCTCTTGTTCTCGCTG 10313 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTCGAA 7456 || |||||||| || || || || || || || |||| || || | | | | Sbjct 10314 ATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATAAAGTGGTTGACCATGCGGTT---G 10370 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||| ||||||||||| || || || || || | ||| || |||||||| || Sbjct 10371 TCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGCCA 10430 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||||||| | | | || |||||||| || ||||| || ||||| || || || || Sbjct 10431 TCTTCAATGGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCGAAGATAAGAACA 10490 Query 7577 TTC 7579 ||| Sbjct 10491 TTC 10493 >seq10816 Length=7005 Score = 93.3 bits (102), Expect = 5e-14 Identities = 130/181 (72%), Gaps = 6/181 (3%) Strand=Plus/Minus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGT---TTGGTTC 7993 || || || ||||| |||||||| || ||||| | |||||| || ||| ||||||| Sbjct 183 CCAATGAGCCGCTTGGCATCAAACACGGTGTTCTCGGGGTT---GGATGTAAGTTGGTTC 127 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || ||||||||||| | ||||| | ||| ||||| ||||| || || || Sbjct 126 TTGGCAGCGTCCCCGATCAAGCGTTCCCCCTCGGGCGTGAACGCCACGTAGGACGGCGTG 67 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 | || ||||| ||||| || || || ||||| |||||| | || | | ||||| ||| Sbjct 66 ATGCGGTTCCCCTGGTCATTGGCGATGATTTCCACGCGGCCATTCTTGAAAACGCCCACG 7 Query 8114 C 8114 | Sbjct 6 C 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634728657060200