Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq30332 122 7e-22 seq15324 105 5e-17 >seq30332 Length=11874 Score = 122 bits (134), Expect = 7e-22 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| || | ||||||||||| ||||| |||||||| || ||||| ||||| Sbjct 10757 GTTACTAATGCTGTGGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACA 10698 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||| || || || || || || ||||||||||| || || ||| Sbjct 10697 AAAGATGCTGGAACCATTGCAGGGCTCAACGTACTGCGAATTATCAATGAGCCGACAGCT 10638 Query 550511 GCTGCACTTGCATATGGACTTGATAAA 550537 ||||| | || ||||| || || ||| Sbjct 10637 GCTGCGATAGCCTATGGTCTGGACAAA 10611 Score = 95.1 bits (104), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | || || ||| | || ||||| ||| ||||||||||| | ||| |||| || Sbjct 11777 AGCTGTCGGAATTGATCTTGGTACCACCTATTCCTGTGTTGGTGTATTCCAACATGGGAA 11718 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || ||||||||||||||||| || |||||| | || || ||| || ||| | ||||| Sbjct 11717 GGTGGAAATTATTGCCAATGACCAGGGTAACCGGACCACGCCAAGCTACGTTGCCTTCAC 11658 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACC 550168 || || || || | || ||||| || || | |||| || || ||||| ||| Sbjct 11657 AGATACGGAGAGGTTGATCGGCGATGCTGCGAAGAACCAAGTTGCAATG--AATCCAACC 11600 Query 550169 AATACTATTTTTG 550181 ||||| |||||| Sbjct 11599 AATACGGTTTTTG 11587 >seq15324 Length=2797 Score = 105 bits (116), Expect = 5e-17 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || ||||| || || || || || || ||||||||||| || ||||| || ||| Sbjct 482 ACAGTCCCAGCTTACTTCAACGATTCTCAGCGTCAAGCTACCAAGGATGCCGGTGTCATT 541 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| || ||||| | |||||||||||||| |||||||||||||| |||| || || Sbjct 542 GCTGGTCTCAATGTCATGCGTATTATCAATGAGCCTACTGCTGCTGCTATTGCCTACGGT 601 Query 550529 CTTGATAA 550536 ||||| || Sbjct 602 CTTGACAA 609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4026603914018450