Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq42385 87.8 5e-12 >seq42385 Length=3762 Score = 87.8 bits (96), Expect = 5e-12 Identities = 144/205 (70%), Gaps = 6/205 (3%) Strand=Plus/Plus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || ||||| || || || ||||| |||| |||||||| | |||||||| | ||| Sbjct 324 GTCTTGACAGCGGTGTCGATGAGACCCTCACGGCCACCCATGGAGTGGAAGAAGAACTCA 383 Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTC-GGGCGA--A 302736 || || || | | ||||| |||| ||||| || || ||| |||| | | Sbjct 384 GTAGGGGTGAGGCCAGCCAGGTAGGAGTTCTCCACGAAGCCCCGGCTCTCAGGGCCATAA 443 Query 302737 TCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTT 302796 || || |||| | ||||| ||||| || | || || ||||| | ||||| ||||| Sbjct 444 TCATC---CTTGATGAAGTGGGGCAGCGTGCGGTGCTTGAAGCCGAAGGGGATCCGCTTA 500 Query 302797 CCATCAACGTTCTGCTGTCCCAGGC 302821 || || ||||||||||| ||||||| Sbjct 501 CCCTCCACGTTCTGCTGCCCCAGGC 525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470857650664985