Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1439 138 7e-28 >seq1439 Length=3833 Score = 138 bits (152), Expect = 7e-28 Identities = 171/232 (74%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 || || |||||||| | ||| || || || | |||| |||||||| ||||| ||||| Sbjct 307 TTACCACCCCTCAAGCGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCG 248 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || ||| ||||| |||| ||||| ||||| || ||||||||||| | ||||| || | Sbjct 247 GACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGG 188 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCT 34925 || | || |||||||| | || || || || || || || | ||| ||| || Sbjct 187 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTAC--ATTCTCGATGGTGTCACTGGGCT 130 Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || |||| || |||||||| || || |||||||| |||||||||||||| Sbjct 129 CAACCTCAAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 78 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325490738660195