Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq15324 147 2e-29 seq30332 114 1e-19 seq18836 96.9 3e-14 >seq15324 Length=2797 Score = 147 bits (162), Expect = 2e-29 Identities = 306/452 (68%), Gaps = 8/452 (2%) Strand=Plus/Minus Query 282018 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 282077 ||||||| || || |||||||||||| |||||| || || || | | ||||| || | Sbjct 932 AATCAATACCCTCATACAAAGAATCAATTTCAATGGTGGTCTGGGCAGTGGAAGAAAGGG 873 Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTGATTC 282136 | || || | ||||| | |||||| ||||| | |||| ||| ||| | | | Sbjct 872 TCCTCTTCGCCCTCTCACAAGATGTCCTCAGTCTCC-TAAGAGCTCTTGGGTTTCCACTG 814 Query 282137 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 282196 | ||| | || | || ||||| || || | | | | || | | || ||| Sbjct 813 ATATCCTTCTTGTTCTTCCTCTTAAACTCCTGGGTAAAGTGGTTCACCATTCTGTTGTCA 754 Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 282256 ||||||||||| || | | ||| | ||| | || ||| | || | || | || ||| Sbjct 753 AAATCTTCACCACCAAGATGAGTGTCTCCAGCTGTGGCTTTCACCTCAAAGATACCCTCT 694 Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| | | || | ||||||| ||| |||||||| | |||||| ||||| |||||| Sbjct 693 TCAATGGTAAGGAGGGAAACATCAAAGGTACCACCACCGAGATCAAAGATAAGCACATTC 634 Query 282317 ATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 | || | |||| | || |||||||| || |||| |||||||||||| || Sbjct 633 TTCTCACCAACACTGGTAGCCTTCTTGTCAAGACCGTAGGCAATAGCAGCAGCAGTAGGC 574 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 ||||| ||||| | || ||||| ||||||||||| || ||||| || || ||||| Sbjct 573 TCATTGATAATACGCATGACATTGAGACCAGCAATGACACCGGCATCCTTGGTAGCTTGA 514 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462 | || |||||||| || || || || || || Sbjct 513 CGCTGAGAATCGTTGAAGTAAGCTGGGACTGT 482 Score = 125 bits (138), Expect = 5e-23 Identities = 267/395 (68%), Gaps = 8/395 (2%) Strand=Plus/Minus Query 282018 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 282077 ||||||| || || |||||||||||| |||||| || || || | | ||||| || | Sbjct 397 AATCAATACCCTCATACAAAGAATCAATTTCAATGGTGGTCTGGGCAGTGGAAGAAAGGG 338 Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTGATTC 282136 | || || | ||||| | |||||| ||||| | |||| ||| ||| | | | Sbjct 337 TCCTCTTCGCCCTCTCACAAGATGTCCTCAGTCTCC-TAAGAGCTCTTGGGTTTCCACTG 279 Query 282137 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 282196 | ||| | || | || ||||| || || | | | | || | | || ||| Sbjct 278 ATATCCTTCTTGTTCTTCCTCTTAAACTCCTGGGTAAAGTGGTTCACCATTCTGTTGTCA 219 Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 282256 ||||||||||| || | | ||| | ||| | || ||| | || | || | || ||| Sbjct 218 AAATCTTCACCACCAAGATGAGTGTCTCCAGCTGTGGCTTTCACCTCAAAGATACCCTCT 159 Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| | | || | ||||||| ||| |||||||| | |||||| ||||| |||||| Sbjct 158 TCAATGGTAAGGAGGGAAACATCAAAGGTACCACCACCGAGATCAAAGATAAGCACATTC 99 Query 282317 ATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 | || | |||| | || |||||||| || |||| |||||||||||| || Sbjct 98 TTCTCACCAACACTGGTAGCCTTCTTGTCAAGACCGTAGGCAATAGCAGCAGCAGTAGGC 39 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAAT 282405 ||||| ||||| | || ||||| ||||||||||| Sbjct 38 TCATTGATAATACGCATGACATTGAGACCAGCAAT 4 Score = 105 bits (116), Expect = 5e-17 Identities = 249/373 (67%), Gaps = 10/373 (3%) Strand=Plus/Minus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 ||||| | |||||||||||||| | || || |||| || || || || ||||| Sbjct 2026 ACATTCAAGATACCATTGGCATCAATGTCGAAGCAGACTGTGATCTGGGGAACACCTCTG 1967 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 ||||||||||||| ||| | | |||| | |||| || ||||| | || Sbjct 1966 GGAGCAGGTGGGATTCCTGAAAGCTCAAATTTACCCAACAAGTTGTTATCCCTGGTCCTG 1907 Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611 ||| ||||||||| | | |||||| || | | ||| || || || || || | Sbjct 1906 GTTCTCTCACCCTCGTACACTTGGATCAACACACCGGGTTGGTTGTCAGAGTATGTAGAG 1847 Query 281612 AATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT----ATCAATAATATTGGTCAT 281667 || ||| || || || || || ||||| || ||||| | ||||| Sbjct 1846 AAGACTTGCTCCTTCTTGGTGGGGATGGTGGTGTTCCTTGGGATCAAGACA----GTCAT 1791 Query 281668 AATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATT 281727 | ||| ||||| || || | |||||| ||||| ||||| ||||| | || | | || Sbjct 1790 GACACCTCCAGCAGTCTCAAGACCAAGGGAAAGGGGAGTAACATCCAAGAGCAATAGATC 1731 Query 281728 TTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATATG 281786 |||| || |||| | | |||| ||||| |||| ||||| | |||||||||||||| Sbjct 1730 CTGAACCTTCTCATTACCCTCACCACTCAAGA-TAGCAGCTTGGACAGCAGCACCATATG 1672 Query 281787 CAACAGCTTCATC 281799 ||||||| ||||| Sbjct 1671 CAACAGCCTCATC 1659 >seq30332 Length=11874 Score = 114 bits (126), Expect = 1e-19 Identities = 362/554 (65%), Gaps = 18/554 (3%) Strand=Plus/Plus Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836 |||||||| || ||||||||||||||||| | | | || || | ||| |||||||| Sbjct 9954 GCACCATAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 10013 Query 281837 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 281895 || | || |||| ||| | ||| || ||||||| || || ||||| | || || Sbjct 10014 AAGTCCTGCAGCAGTT-TCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCACGAT 10072 Query 281896 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 281955 ||||| | ||| ||||| || ||||| | |||| | | ||||| || || || || Sbjct 10073 GTCATGGATCTGCGATTTGTCGAGTTTGGCATCCCGCAGGGCCTTTTCCACAGGATCCAG 10132 Query 281956 ACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA--GA-GTGAC 282012 | | | |||| ||| | | || ||||| || |||||| |||| || ||| Sbjct 10133 AGTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATGGATGTG-- 10190 Query 282013 ATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAG 282071 || || ||||| || || | | |||||||| ||| || | | || || ||||| Sbjct 10191 --TAGAAGTCAATACCCTCATAGAGAGAATCAATTTCGATACTGGCCTGCGTGCTAGAAG 10248 Query 282072 ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG----CTTTTGCT 282127 | || | ||| || ||||| || ||||| || | || | || | | ||| | || Sbjct 10249 ACAGAGTACGCTTTGCACGCTCGCATGCGGTGCGGAGGCGACGAACTGCTCTCTTGTTCT 10308 Query 282128 GATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA 282187 |||| ||| | || | || | |||||| || ||| | | | || | Sbjct 10309 CGCTGAT----GTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATAAAGTGGTTGACCATG 10364 Query 282188 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 282247 || || ||||| ||||| || ||||| | ||| | |||| || | | | || | || Sbjct 10365 CGGTTGTCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAG 10424 Query 282248 AGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATA 282307 | |||||||||| | || || | |||||| ||| ||||| || | || || ||| Sbjct 10425 ATGCCATCTTCAATGGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCGAAGATA 10484 Query 282308 AGTACATTCATTTC 282321 || |||||| |||| Sbjct 10485 AGAACATTCCTTTC 10498 Score = 109 bits (120), Expect = 4e-18 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 |||||| |||||||||||||| | |||| |||| | || || ||||| || |||| Sbjct 11587 CAAAAACCGTATTGGTTGGATTCATTGCAACTTGGTTCTTCGCAGCATCGCCGATCAACC 11646 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 || || ||||| || | ||| || ||| || || || ||||| || ||||| |||| Sbjct 11647 TCTCCGTATCTGTGAAGGCAACGTAGCTTGGCGTGGTCCGGTTACCCTGGTCATTGGCAA 11706 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 ||||||| || || |||| ||| ||||||| ||||| | | || || || | ||||| Sbjct 11707 TAATTTCCACCTTCCCATGTTGGAATACACCAACACAGGAATAGGTGGTACCAAGATCAA 11766 Query 282870 TACCAATAGC 282879 | || | ||| Sbjct 11767 TTCCGACAGC 11776 >seq18836 Length=48291 Score = 96.9 bits (106), Expect = 3e-14 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 131176 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 131235 ||| || || ||| | ||||| || ||||| || |||||| | ||| | | | ||||| Sbjct 26148 TGTTGTGGCTACAGTGGCATTCGGAATGGGCATCAATAAAGCAGATATCCGGATGGTTAT 26207 Query 131236 TCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 131295 ||||||||| || || ||| | || ||| ||||||||||||||||| ||||| ||||| Sbjct 26208 TCATTACGGTGCCCCTAAGGAAATGGAATCCTATTATCAAGAAATTGGGAGAGCTGGTCG 26267 Query 131296 TGATGG 131301 ||| || Sbjct 26268 TGACGG 26273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3738131179624530