Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1439 91.5 1e-13 >seq1439 Length=3833 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578 || |||||| ||||| || | ||| | ||| || ||| || || || |||||||| || Sbjct 308 GTTACCACCCCTCAAGCGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTC 249 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 ||| || ||||| | || |||| || || || || || |||| | ||||||||| | Sbjct 248 GGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGG 189 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATT 33697 || | ||||| ||||| || || || | ||| || | |||||| || | | Sbjct 188 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTA-CATTCTCGATGGTGTCACTGGGCT 130 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || |||| ||||| || || || || | || || |||||||||||||| Sbjct 129 CAACCTCAAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 78 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328500070497600