Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq25785 118 3e-23 seq37349 114 4e-22 seq33657 114 4e-22 seq12392 98.7 3e-17 >seq25785 Length=80421 Score = 118 bits (130), Expect = 3e-23 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 33126 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAG 33185 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 33186 CCCGGGCTTCAGC 33198 Score = 118 bits (130), Expect = 3e-23 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 44437 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAG 44378 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 44377 CCCGGGCTTCAGC 44365 >seq37349 Length=2219 Score = 114 bits (126), Expect = 4e-22 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 184 GGCTGAAGGAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 125 Query 2828 CCCGGGCTTCAGC 2840 ||| ||||||||| Sbjct 124 CCCAGGCTTCAGC 112 >seq33657 Length=15852 Score = 114 bits (126), Expect = 4e-22 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 8201 GGTTGAAGTAGCTCAGCTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAGC 8142 Query 2828 CCCGGGCTTCAGC 2840 || |||||||||| Sbjct 8141 CCTGGGCTTCAGC 8129 >seq12392 Length=13588 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 10770 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 10711 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 10710 CCGGGTTTCGGC 10699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15840775363725