Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1439 105 7e-18 seq39853 86.0 6e-12 >seq1439 Length=3833 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558 |||| ||| || || || ||||||||||| || |||||||||||| | |||| | Sbjct 292 CGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCA 233 Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || ||||| ||||| || || |||| | |||||||||||| || |||||||| || Sbjct 232 TCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTG 173 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || || || || || || || | ||||| | || || || ||||| ||| Sbjct 172 TCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGCTCAACCTCAAGAGTGATG 113 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || ||||| | || || || || || |||||||| Sbjct 112 GTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTT 75 >seq39853 Length=31101 Score = 86.0 bits (94), Expect = 6e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291 ||| || || |||| || | || || || | ||||||||||||||||||||| |||| Sbjct 9831 CGCTATCATTGAATCCCAGACAGAGACTGGCACACCGTACATGCTGTACAAAGACTCTTG 9890 Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGA 8351 |||| || |||||||| | ||| | || ||||| |||||||||||||| | || Sbjct 9891 CAACCGGAAGAGCAATCAGCGGAACTTAGGGACCATCAAGTGCAGCAATCTGTGTACAGA 9950 Query 8352 AATTGTACAGTA 8363 ||| || |||| Sbjct 9951 AATAGTGGAGTA 9962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505076808680600