Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20albicilla_20[refseq_20GCF_5F000691405.1_202014-05-15] 50,905 sequences; 1,133,549,865 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq23309 102 6e-17 >seq23309 Length=21015 Score = 102 bits (112), Expect = 6e-17 Identities = 136/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || |||| |||||||| || |||||||| ||||| || || || ||||||| || Sbjct 18923 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATC 18982 Query 27549 TCCCTCTTCCCTG-TGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607 ||||| || ||| |||| ||| ||| ||| |||| || || | || || || || | Sbjct 18983 CCCCTCCTCTCTGGTGCT-GAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCAT 19041 Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 27667 |||| ||||| || || || | ||||||||||||| || || || || || || || | Sbjct 19042 CCCAAATCTTCACACCTTTTGCAGAGAGCTCTTTGGCATTCGTAGAACC-CT-ACAAAAC 19099 Query 27668 ACAG 27671 |||| Sbjct 19100 ACAG 19103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369277956001055