Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq3 156 5e-33
seq178 118 1e-21
>seq3
Length=17578601
Score = 156 bits (172), Expect = 5e-33
Identities = 207/286 (72%), Gaps = 1/286 (0%)
Strand=Plus/Plus
Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178
|||| |||||| | || | | |||||||||||||||||||| | ||||||||||||
Sbjct 16783732 GGGCACGCCGTCGGGGCCGATGAGGAACTTCTCGAAGTTCCAGGAGATGTCGTTGCGGCA 16783791
Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238
|| || |||||| ||| ||| |||| | ||| |||| | ||||||| ||
Sbjct 16783792 GACGGGGGACCAGATGATGTACTGCGGGTTGGTCATCAGCGAGGAGGGGTCGTCGTGCGG 16783851
Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTC 83298
||||| ||||||| |||||||||||||| || || || | ||||| |||||
Sbjct 16783852 GAAGGGCAGCGCCTCTCTCAGGAAGGCGAAGAGGGGGTGCGCGTTCTTCCCGTTCACCTC 16783911
Query 83299 GCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAG 83358
|||||||||||| || | || || |||| | | ||||| || ||||| ||||||| |||
Sbjct 16783912 GCACTTCTCGAACAGGAGGAAATTGGGCTTGTACCCGTTGCCGGGACGAACGTGCTCCAG 16783971
Query 83359 GGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGAC-CGAA 83403
|| || |||||| | ||| || ||||||| | ||| ||||
Sbjct 16783972 CGAGAGCGGGATCTCCTCGTTCGTAGCATTTTCCTAGGGACGCGAA 16784017
>seq178
Length=1460915
Score = 118 bits (130), Expect = 1e-21
Identities = 121/156 (78%), Gaps = 3/156 (2%)
Strand=Plus/Minus
Query 83388 TTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTA 83447
|| |||||| || || ||||| || ||||| || ||||| ||||||| ||| | ||
Sbjct 539932 TTACCTGGTAGCCAAATTGGTTGCAGGGGAAACCCAGCACGACCAGCCGCCGGGGG--TA 539875
Query 83448 GGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACG 83507
| | | ||||||| ||| | ||| ||||| ||||| |||||| | |||||||||||||
Sbjct 539874 GCGGGCT-TGCAGCTGGTTGAGCTGGGTGTAGTCCCGCACCGTGGTGCCTCAGAGGGACG 539816
Query 83508 CTACGTTCTCGATGAGCAAGACCCGGCCCCGTAAGA 83543
| |||||||||||||| | || |||||||| ||||
Sbjct 539815 CCACGTTCTCGATGAGGACCACGCGGCCCCGGAAGA 539780
Score = 113 bits (124), Expect = 5e-20
Identities = 220/312 (71%), Gaps = 16/312 (5%)
Strand=Plus/Minus
Query 83056 GAGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGG-CA-GCGGTGGCTGTACCTG 83113
||| ||| || |||||||||||||| || || ||| || |||| ||||||| |
Sbjct 540356 GAGGAGGCGCTGGATGTCGGGCTCCA--GCTGGGCGGTGGGCATGCGGGGGCTGTAGCGC 540299
Query 83114 CGCACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTG 83173
|| | || || || | |||||||| ||||||||| |||||||||| | |||| |
Sbjct 540298 CGGAAAGGTTCCCCCTCGGGACCCACCAGGAACTTCTCAAAGTTCCAGGAGATGTCGGAG 540239
Query 83174 CGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGC-GTGCTCATGTCGTC 83232
|| |||||| ||||| | || | || ||| ||| || |||| | |||||
Sbjct 540238 CGCTGCACTGGGCTCCAGGTGAGGAAGCGAGGTTCGGTCATCAGGTGTGC-CGCCTCGTC 540180
Query 83233 GCTAGGCGCCGGCAGG---GCCTCTCGTAGGAAGGCGAAGAGCGGATG--TGCCCTTGCA 83287
| || || |||||| |||| || ||| ||||||||| || || || ||| ||
Sbjct 540179 GGCCGGTGCAGGCAGGTGAGCCT-TC--AGGTAGGCGAAGACGGGGTGGGTGTCCT-GC- 540125
Query 83288 CCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGG 83347
|| || |||| |||||||| |||||| | ||||| ||||||||||| ||| || ||
Sbjct 540124 CCATTCACCTGGCACTTCTGGAAGAGGGTGAAGTTGGGCTCGAAGCCACCCCCTGGCCGC 540065
Query 83348 ACGTGCTTCAGG 83359
|| |||||||||
Sbjct 540064 ACATGCTTCAGG 540053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608789015010920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |