Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq429 98.7 7e-16
>seq429
Length=9448605
Score = 98.7 bits (108), Expect = 7e-16
Identities = 111/148 (75%), Gaps = 8/148 (5%)
Strand=Plus/Plus
Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461
|||||||||||||| |||||||| ||||| |||||||| ||||| | || || || |||
Sbjct 343582 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCT 343641
Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517
|| | |||||| ||||||| |||| || |||||||| |||||||||||
Sbjct 343642 CTGGTGCTGAAACCCTGCTTATC----CAGGAACTCACGTGATCCATTAGCATCCCAAAT 343697
Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTG 97545
| |||||| ||| | |||||||||
Sbjct 343698 CTTCACACCTTTTGCAGAGAGCTCTTTG 343725
Score = 84.2 bits (92), Expect = 2e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176
||||||||||| ||||| |||| | || |||||||| ||||| || |||||||| |||
Sbjct 339943 GTGACATGGGCAATCATGTAAGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCT 340002
Query 97177 AGTCCCATATCAGCTGATCTTTGATA 97202
||||||||||| | || || |||||
Sbjct 340003 AGTCCCATATCTCCAGACCTCTGATA 340028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346779676362110
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |