Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq196 100 5e-16
>seq196
Length=13513712
Score = 100 bits (110), Expect = 5e-16
Identities = 109/145 (75%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 52185 GGTACAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTT 52244
||| ||||||||| | |||| || || || || |||| ||||| || ||||| || ||
Sbjct 5153725 GGTGCAGTTCCATGTGACTATTGGCCACACAGCCTTGTCTATTTATATTGATTGTCCTTT 5153784
Query 52245 TCCAAAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGG 52304
|| |||||||| || ||| || ||| ||||| || | | ||||| || ||||||||
Sbjct 5153785 CCCTAAATGGATGCACTGGGGTGTAATTTTCTATGCTGTCACCTTCATTTTCCTGTTTGG 5153844
Query 52305 TAACTTCTATTTTAGAACATACAAG 52329
||||||||| | | | ||||| |||
Sbjct 5153845 TAACTTCTACTATCGGACATATAAG 5153869
Score = 98.7 bits (108), Expect = 2e-15
Identities = 103/133 (77%), Gaps = 2/133 (2%)
Strand=Plus/Plus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|| ||||| ||||||||| | ||| | ||||| ||||| |||||||||| ||||||||
Sbjct 5153101 GCTTTTTTCGGAGCTCAGATGAATGCATTTATTCATGTCATTATGTACATGTATTATGGA 5153160
Query 52117 ATGGCCGCTTGTGGTCCTATGTT-CAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175
| || || ||||| |||| || |||||| || || ||||||||||| || | || ||
Sbjct 5153161 TTAGCTGCCTGTGGCCCTAAATTTCAGAAA-TACCTGTGGTGGAAACGATACTTGACCAT 5153219
Query 52176 AATGCAGTTGGTA 52188
| |||| |||||
Sbjct 5153220 ACTGCAACTGGTA 5153232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923184994620920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |