Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq340 390 8e-104
>seq340
Length=24413552
Score = 390 bits (432), Expect = 8e-104
Identities = 694/1002 (69%), Gaps = 14/1002 (1%)
Strand=Plus/Minus
Query 107628 TACCTCAACATAACCAGAGACTGTGAGCG-CTTCAAGG---CCCAAAGGAAGTTCATACA 107683
||||| ||||| || | ||||| ||| |||||||| ||| || ||||| |
Sbjct 5936862 TACCTGAACATGACTAAGGACTGC-AGCAACTTCAAGGAGACCC---GGCGATTCATCGA 5936807
Query 107684 GTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGA 107743
|||||| ||||| | || ||| || |||||||| |||||||| ||||| |||| |
Sbjct 5936806 GTTCCCGCTGAGCCAGGAGGAGGCGGAGTTCCCCATCGCCTACTCCATGGTCATCCACAA 5936747
Query 107744 GAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTG 107803
|| || || | ||||| ||||| ||||| || | || ||||| |||||| | |||||
Sbjct 5936746 CAAAATCGACATGTTTGAGCGGCTCCTGCGCTCCCTCTACGCCCCCCAGAACGTCTACTG 5936687
Query 107804 TGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTC 107863
|||||| | || |||||||| | | ||| ||||||| || |||||| |
Sbjct 5936686 CGTCCACATTGACAGCAAGTCCCCGGCCGCCTTCCAAGAGGCCGTGCGGGCCATCGCAGC 5936627
Query 107864 CTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTC 107923
|||||||| ||| ||||| |||| || |||| |||||| ||||||||||||||
Sbjct 5936626 CTGCTTCCGCAACGTCTTTGTGGCGAGCCGCTTGGAAGAGGTGGTGTATGCCTCCTGGTC 5936567
Query 107924 CAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAA 107983
| | |||| |||||||| ||||| ||| | ||| |||| | |||| | |||| |||
Sbjct 5936566 CCGGCTGCAGGCTGACCTCAACTGCATGCAGGACCTGCTGCGGAGCCCCATGCCGTGGCG 5936507
Query 107984 GTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCT 108043
||| | || || || ||||| || || |||||||| |||||||| |||||| ||||
Sbjct 5936506 CTACGTCCTCAACACCTGCGGCACTGATTTCCCCATCAAGACCAACATCGAGATCGTCCG 5936447
Query 108044 GGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaa 108103
||||| ||| || || |||| ||||||| |||||||| ||| | || | ||||
Sbjct 5936446 TGCCCTGAAGGTGCTGCAGGGGCAGAACAGCATGGAGTCGGAGAAGGCCTCGGGCCCCAA 5936387
Query 108104 aaaaaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGA- 108162
| | |||||| |||| | | || ||| | | | || | |||| | |
Sbjct 5936386 GCAGGAGCGCTGGCGGTACCACCACGAAGTGGGGAAGTTCATCTTCCGGA-CAGCCACAG 5936328
Query 108163 TGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCT 108222
||| || || || | || | ||||||||||| || || || || |||||| |
Sbjct 5936327 AGAAACCGCCGCCACCGCACAACTATCCCATGTTCACGGGCAACGCGTACATTGTGGTCA 5936268
Query 108223 CTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGG 108282
| || ||||| || || | |||| || ||||| | | || | | || ||||
Sbjct 5936267 CACGGGCCTTCGTGCAGTACATCTTTGAGAACCCCACGGCGCAGCAGTTCCTCGAGTGGG 5936208
Query 108283 TCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCT--TCAGCGTGCTCCGTG 108340
||| |||||||| ||||||||||||||| ||||||||||||| | || ||| ||| |
Sbjct 5936207 CCAAGGACACCTACAGCCCCGACGAACACGTCTGGGCCACCCTCAACCGCATGC-CCG-G 5936150
Query 108341 GATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGC 108400
|||| ||| | | || | ||||| || |||| ||||||| ||| | |
Sbjct 5936149 CGTGCCGGGCGCCATGCCCCAGAATGACAAGTTCCAGCTCTCGGACATGAACGCCCTGCC 5936090
Query 108401 CAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACC 108460
| | || |||||||||||||||| ||||| || ||||| ||| ||||| || | ||
Sbjct 5936089 CCGCCTGGTCAAGTGGCAGTACCTGGAGGGCGACACCAGCAAGGGCGCGCCCTACCCGCC 5936030
Query 108461 CTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGAT 108520
|||| | || || | | | ||| ||||||| |||||||| || ||| || |||| |
Sbjct 5936029 CTGCGCCGGCCAGCACCAGCGCGCCGTCTGCATCTACGGGGCGGGCGACGTGCCCTGGCT 5935970
Query 108521 TCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCT 108580
|||||| | || ||||||||||| |||||||| ||||| ||||| | || | |
Sbjct 5935969 GCTCCAGCAGCACCACCTCTTGGCCAACAAGTTCGACCCCCTCGTGGACAACGCCGCCAT 5935910
Query 108581 GCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGG 108622
||||| | || ||| |||| || || |||||| |||| ||
Sbjct 5935909 CCAGTGTCTCGAGGAGCACCTGCGCCACAAGGCCCTCTACGG 5935868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348264457849902
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |