Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq841 98.7 1e-15
seq396 98.7 1e-15
>seq841
Length=5312791
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| || || || || ||||| || || || |||| | ||||| ||||| || |||
Sbjct 4754239 GTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCA 4754298
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
|| ||||||| | ||||||||||| || |||||||| ||||| ||| || |||
Sbjct 4754299 GCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTT 4754358
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| ||||||| ||||||| || | ||||||||||||| ||
Sbjct 4754359 ACATTCTCGATGGTGTCACTGGGCTCAACCTCAAGAGTGATGGTCTTGCCGGTCAGGGTC 4754418
Query 139748 TTTACGAATATTTGCAT 139764
|| || || || |||||
Sbjct 4754419 TTCACAAAGATCTGCAT 4754435
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| || || || || ||||| || || || |||| | ||||| ||||| || |||
Sbjct 4753393 GTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCA 4753452
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
|| ||||||| | |||||||| || || |||||||| ||||| ||| || ||
Sbjct 4753453 GCGAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 4753512
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| ||||||| || || | ||| | ||||||||||||| ||
Sbjct 4753513 ACATTCTCAATGGTGTCACTGGGCTCAACTTCTAGGGTGATGGTCTTGCCGGTCAGGGTC 4753572
Query 139748 TTTACGAATATTTGCAT 139764
|| || || || |||||
Sbjct 4753573 TTCACAAAGATCTGCAT 4753589
>seq396
Length=9930490
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| || || || || ||||| || || || |||| |||||| ||||| || |||
Sbjct 5100933 GTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGTCCGTCTTCCAGCTGCTTGCCA 5100874
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| ||||||| | ||||||||||| || |||||||| ||||| ||| || ||
Sbjct 5100873 GCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 5100814
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| ||||||| ||||||| ||| | |||||||| |||| ||
Sbjct 5100813 ACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTC 5100754
Query 139748 TTTACGAATATTTGCAT 139764
|| || || || |||||
Sbjct 5100753 TTCACAAAAATCTGCAT 5100737
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| || || || || ||||| || || || |||| |||||| ||||| || |||
Sbjct 5101161 GTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCTTCCAGCTGCTTGCCA 5101102
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| ||||||| | ||||||||||| || |||||||| ||||| ||| || ||
Sbjct 5101101 GCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 5101042
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| ||||||| ||||||| ||| | |||||||| |||| ||
Sbjct 5101041 ACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTC 5100982
Query 139748 TTTACGAATATTTGCAT 139764
|| || || || |||||
Sbjct 5100981 TTCACAAAGATCTGCAT 5100965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496057656581600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |