Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08- 04] 1,023 sequences; 1,178,409,481 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq218 98.7 1e-15 >seq218 Length=12993727 Score = 98.7 bits (108), Expect = 1e-15 Identities = 109/144 (76%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 21490 ATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCC 21549 || || |||| |||| ||||| || | ||| |||||||| || | || ||||||||||| Sbjct 5719093 ATTCATACCT-CATCTCTACTGATGAGTTCGTTAGAAAAAGTGAGTCCAGGCATTAATCC 5719151 Query 21550 TCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGC 21609 || || || | |||||| ||||| ||||| | || |||||||| || || || || || Sbjct 5719152 CCTTTTCTTCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGC 5719211 Query 21610 AGCAAATGCAACTAATCGTTCACC 21633 ||||| || |||| ||||| || Sbjct 5719212 TGCAAAAGCTACTACACGTTCTCC 5719235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531893998318520