Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08- 04] 1,023 sequences; 1,178,409,481 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq429 95.1 3e-14 seq537 91.5 4e-13 >seq429 Length=9448605 Score = 95.1 bits (104), Expect = 3e-14 Identities = 123/168 (73%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 111389 TACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACG 111448 ||| ||||| || || || | |||||| ||| || |||||||||| ||||||||||| Sbjct 343734 TACGAATGCCAAAGAGCTCTCTGCAAAAGGTGTGAAGATTTGGGATGCTAATGGATCACG 343675 Query 111449 TGACTTTCTAGAT--TCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTT 111506 ||| || || ||| ||| ||| | | || || || || ||| | ||||||||| Sbjct 343674 TGAGTTCCTGGATAAGCAG--GGTTTCAGCACCAGAGAGGAGGGGGATTTGGGACCAGTT 343617 Query 111507 TACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 || || || || ||| | |||||||| ||||| |||||| |||||| Sbjct 343616 TATGGTTTCCAGTGGAGGCACTTTGGAGCAGAATACAAAGATATGCAC 343569 >seq537 Length=7949590 Score = 91.5 bits (100), Expect = 4e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| |||| |||| || ||||| || || |||| ||||| || ||||| || ||| Sbjct 7423463 GCCCAGCAGCTCTGGTACGCTATCATTGAATCCCAGACAGAGACTGGCACACCGTACATG 7423522 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 |||||||||| ||||||||||| ||| ||| |||| | || | || || || || Sbjct 7423523 CTGTACAAAGACTCGTGCAACCGGAAGAGCAATCAGCGGAACTTAGGGACCATCAAGTGC 7423582 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263 ||||| || ||||| || || | || || ||| Sbjct 7423583 AGCAATCTGTGTACAGAAATAGTGGAGTATACC 7423615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303336516699986