Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08- 04] 1,023 sequences; 1,178,409,481 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq429 96.9 3e-15 >seq429 Length=9448605 Score = 96.9 bits (106), Expect = 3e-15 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || ||||| |||| ||| ||||| | || |||||||||||||| || ||||| Sbjct 339937 AGCCCTGTGACATGGGCAATCATGTAAGTGAGCAGTGAATAGCTGGCAATATTGAAAGGC 339996 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 ||||| | ||||| ||||| ||||||||||| || || || || | ||||||| Sbjct 339997 ACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCGTTTAGA 340056 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCA 20399 ||||| || || || | || || || || || ||||||| Sbjct 340057 ACATAGAACTGGCAAAGGGCATGGCATGGAGGCAGAGCCATCA 340099 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 20534 GCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCT-GTG 20592 || ||||||||||||||||||||||| ||||| |||||||||||||||||| ||| ||| Sbjct 343588 GCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCTCTGGTG 343647 Query 20593 CGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCC 20652 | | || || |||||||||| | || ||||| ||||| ||||| || || Sbjct 343648 C-TGAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAATCTTCACACC 343706 Query 20653 TGTTCTTGAAAGCTC 20667 | || || ||||| Sbjct 343707 TTTTGCAGAGAGCTC 343721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441367155945320