Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq841 84.2 2e-11
seq396 82.4 5e-11
>seq841
Length=5312791
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| | ||| | | || | ||| ||||| || || || || |||||||| ||
Sbjct 4754209 CCACCCCTCAAGCGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAC 4754268
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| | | | | ||||| | || ||||||||| | |||| | ||| || ||| |||
Sbjct 4754269 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGA 4754328
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| || ||| |||||| | || || || || || || ||
Sbjct 4754329 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGCTCAACC 4754388
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180
|| | || ||||| || || ||||| || || ||||| || ||||| |||
Sbjct 4754389 TCAAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTTT 4754439
>seq396
Length=9930490
Score = 82.4 bits (90), Expect = 5e-11
Identities = 148/213 (69%), Gaps = 5/213 (2%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAAT 15030
||| ||||| || || || || |||||||| || || || || ||||||| |
Sbjct 5100940 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCA--GACAAGGTGCGTCCGTCTTCCAGC 5100883
Query 15031 TGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATT 15090
|| |||||||| | |||| | ||| || ||| ||||| ||||||||||| ||
Sbjct 5100882 TGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATC 5100823
Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150
||| || ||| | || || || || || || || || | ||| ||||| || ||
Sbjct 5100822 TTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCA 5100763
Query 15151 GTCAGAGTTTTTACAAAAATTTGCATATTTGAA 15183
||||| || || |||||||| ||||| ||||||
Sbjct 5100762 GTCAGGGTCTTCACAAAAATCTGCAT-TTTGAA 5100731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357387544103555
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |