Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq396 132 1e-25
seq841 123 6e-23
>seq396
Length=9930490
Score = 132 bits (146), Expect = 1e-25
Identities = 161/219 (74%), Gaps = 3/219 (1%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| ||||| ||||| || || ||||| |||| ||||||||||| ||| || | ||| ||
Sbjct 5100949 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGTCCGTC 5100890
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | |||||| || || ||| ||||| ||
Sbjct 5100889 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTC 5100830
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| || | |||||| | | || || || | ||||| ||
Sbjct 5100829 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGT 5100770
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
||| || || || || ||||||||||| || ||||||
Sbjct 5100769 CTTGCCAGTCAGGGTCTTCACAAAAATCTG---CATTTT 5100734
Score = 127 bits (140), Expect = 5e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| ||||| |||||||| || ||||| |||| ||||||||||| || || | ||| ||
Sbjct 5101177 CAGCACAAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTC 5101118
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | |||||| || || ||| ||||| ||
Sbjct 5101117 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTC 5101058
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| || | |||||| | | || || || | ||||| ||
Sbjct 5101057 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGT 5100998
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || |||||||| || ||
Sbjct 5100997 CTTGCCAGTCAGGGTCTTCACAAAGATCTG 5100968
>seq841
Length=5312791
Score = 123 bits (136), Expect = 6e-23
Identities = 159/219 (73%), Gaps = 3/219 (1%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| ||||| || || || || ||||| |||| ||||||||||| || || | |||||
Sbjct 4754223 CAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 4754282
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || |||||||| || | |||||| || || ||| ||||| ||
Sbjct 4754283 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTC 4754342
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||| || |||| |||||| | | || || || | ||||| ||
Sbjct 4754343 CTGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGCTCAACCTCAAGAGTGATGGT 4754402
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
||| || || || || |||||||| || || ||||||
Sbjct 4754403 CTTGCCGGTCAGGGTCTTCACAAAGATCTG---CATTTT 4754438
Score = 118 bits (130), Expect = 2e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| ||||| || || || || ||||| |||| ||||||||||| || || | |||||
Sbjct 4753377 CAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 4753436
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || |||||||| || | |||||| || || ||| ||||| ||
Sbjct 4753437 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 4753496
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||| || || | |||||| | | || || || | ||||| ||
Sbjct 4753497 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACTTCTAGGGTGATGGT 4753556
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || |||||||| || ||
Sbjct 4753557 CTTGCCGGTCAGGGTCTTCACAAAGATCTG 4753586
Score = 96.9 bits (106), Expect = 8e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
|| ||| | ||| ||||| || || || || ||||| |||| ||||||||| | || ||
Sbjct 4753596 TCTAAGACGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGT 4753655
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| ||||||||||||||||| || |||||||| || | |||||| || || ||| ||
Sbjct 4753656 GCGCCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGGGGAATGCC 4753715
Query 199528 TTCTCGCTCCTGAATCTT 199545
||| ||||| |||||
Sbjct 4753716 TTCCTTGTCCTGGATCTT 4753733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178906147653541
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |