Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq774 95.1 5e-14
seq945 87.8 7e-12
seq307 84.2 9e-11
>seq774
Length=5862070
Score = 95.1 bits (104), Expect = 5e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|||||| |||| || | ||||| || || ||||||||||| | || || || || ||
Sbjct 3850685 GTTACTAATGCTGTGGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACA 3850744
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|||||||| ||| ||||| || | || || || |||||||| ||||| || |||||
Sbjct 3850745 AAAGATGCTGGAACCATTGCAGGGCTCAACGTACTGCGAATTATCAATGAGCCGACAGCT 3850804
Query 451433 GCTGCTCTAGCATATGGACT 451452
||||| |||| ||||| ||
Sbjct 3850805 GCTGCGATAGCCTATGGTCT 3850824
>seq945
Length=4434982
Score = 87.8 bits (96), Expect = 7e-12
Identities = 274/419 (65%), Gaps = 9/419 (2%)
Strand=Plus/Minus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
|| |||||| | | ||||| | || || ||||| | || || || || || ||
Sbjct 2045680 GGCAAGCCCAAGGTGCAAGTGGAGTACAAGGGTGAGATGAAGACCTTCTTCCCAGAGGAG 2045621
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || ||||| ||||| || ||||| || | || || ||| | || | | |
Sbjct 2045620 ATCAGCTCCATGGTCCTTACCAAGATGAAGGAGATCGCTGAGGCCTATCTGGGG-CGCAA 2045562
Query 451313 GTTACTGA-TGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371
| | | || ||| || || || || || || || |||||||| | || || || || ||
Sbjct 2045561 GGTGCAGAATGCTGTCATCACAGTGCCTGCCTACTTCAATGACTCCCAGCGCCAGGCCAC 2045502
Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431
||||| || || || |||| | ||||| | || ||||| || || || |||||
Sbjct 2045501 CAAAGACGCTGGCACCATCACTGGCCTTAATGTGATGCGCATTATCAACGAGCCCACAGC 2045442
Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAA-----ACAGAAGaaaaaaaTATT 451486
||||||| |||| ||||| || ||| || ||| | | | | ||| || ||| |
Sbjct 2045441 AGCTGCTATAGCCTATGG-CTTGGACAA-GAAAGGTACCCGGGCCGGAGAGAAGAATGTG 2045384
Query 451487 TTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGG 451546
| | ||||| || || || || ||| |||| || | ||| | ||||| |||||
Sbjct 2045383 CTCATCTTTGACTTGGGAGGGGGCACTTTTGATGTATCCATCCTTACCATTGAGGATGGC 2045324
Query 451547 GTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
| ||||| || ||| | || |||||| || || || || || || || |||| ||
Sbjct 2045323 ATCTTTGAGGTGAAGTCCACAGCTGGTGACACCCACCTGGGTGGGGAGGACTTTGACAA 2045265
>seq307
Length=10662554
Score = 84.2 bits (92), Expect = 9e-11
Identities = 83/107 (78%), Gaps = 3/107 (3%)
Strand=Plus/Plus
Query 451190 AAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAA---ACTAAAACTTTTGCTCCT 451246
|||| |||||| |||||||||| || | ||||| | || ||||| |||||||||
Sbjct 47637 AAAGCCAAGCCCCATATTCAAGTTGATGTTGGAGGTGGACAGACAAAAACATTTGCTCCT 47696
Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGA 451293
||||||||||| ||||||| || || || ||||| ||||| || ||
Sbjct 47697 GAAGAAATTTCTGCTATGGTCCTGACAAAGATGAAGGAAACTGCTGA 47743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975692503888484
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |