Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq774 122 7e-22
>seq774
Length=5862070
Score = 122 bits (134), Expect = 7e-22
Identities = 115/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||||| |||| || | ||||||||||| ||||| |||||||| || ||||| |||||
Sbjct 3850685 GTTACTAATGCTGTGGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACA 3850744
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510
|||||||||||| ||||| || || || || || || ||||||||||| || || |||
Sbjct 3850745 AAAGATGCTGGAACCATTGCAGGGCTCAACGTACTGCGAATTATCAATGAGCCGACAGCT 3850804
Query 550511 GCTGCACTTGCATATGGACTTGATAAA 550537
||||| | || ||||| || || |||
Sbjct 3850805 GCTGCGATAGCCTATGGTCTGGACAAA 3850831
Score = 91.5 bits (100), Expect = 1e-12
Identities = 137/193 (71%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050
|||| | || || ||| | || ||||| ||| ||||||||||| | ||| |||| ||
Sbjct 3849666 AGCTGTCGGAATTGATCTTGGTACCACCTATTCCTGTGTTGGTGTATTCCAACATGGGAA 3849725
Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110
|| ||||| ||||||||||| || |||||| | || || ||| || ||| | |||||
Sbjct 3849726 GGTGGAAATCATTGCCAATGACCAGGGTAACCGGACCACGCCAAGCTACGTTGCCTTCAC 3849785
Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACC 550168
|| || || || | || ||||| || || | |||| || || ||||| |||
Sbjct 3849786 AGATACGGAGAGGTTGATCGGCGATGCTGCGAAGAACCAAGTTGCAATG--AATCCAACC 3849843
Query 550169 AATACTATTTTTG 550181
||||| ||||||
Sbjct 3849844 AATACGGTTTTTG 3849856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029241899146270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |