Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq655 131 3e-25
seq264 120 6e-22
seq218 86.0 1e-11
>seq655
Length=3213
Score = 131 bits (144), Expect = 3e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474
||||||| ||| ||||| ||||| ||||| ||||| || | | ||||| || |||
Sbjct 2226 AGGACCTTCTGCTTGAGCTGGGCGACCTGCTCCCGGAGCAGGCTGGCGGTGGAGGCCAGC 2285
Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534
| | ||| | |||||| |||||| ||||||||||| || | ||| ||||||||
Sbjct 2286 TCCGTGTTCTGGCTCTTGAGGCTCTTCACCTTCTCCTCCAGGCGGGAGATTCGTTCCAGC 2345
Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594
|| | | |||||||||| || || | |||||||| || || || ||||||||||||
Sbjct 2346 TTCCTCTTACGGCATTTGGAAGCGGCGATGCGGTTCCTCAGCCTTTTTCGTTCCGCCTTG 2405
Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626
|| |||||||| ||||| ||||| || ||
Sbjct 2406 ATACGTTCCTGCGTGTCCATATCGATGGGGGA 2437
>seq264
Length=326058
Score = 120 bits (132), Expect = 6e-22
Identities = 101/124 (81%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548
||| ||| ||||||| |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct 256635 CTTCAGCGCCTTCACCTTCTCCTCCAGCCGGGCGATGCGCTCCAGCTTCCGCCGGCGGCA 256576
Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608
|||| ||| || | ||||||||| || | ||| || |||||||| | || ||||||
Sbjct 256575 CTTGGAGGCGGCGATGCGGTTCCGCAGCCGCTTGCGCTCCGCCTTCAGCCGCTCCTGGCT 256516
Query 241609 CTCC 241612
||||
Sbjct 256515 CTCC 256512
>seq218
Length=12993727
Score = 86.0 bits (94), Expect = 1e-11
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 48164 CTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAA 48223
|||||||| |||| || || ||| |||||||| | ||||| | || ||||| |||
Sbjct 5719111 CTGATGAGTTCGTTAGAAAAAGTGAGTCCAGGCATTAATCCCCTTTTCTTCAGCCAAAAA 5719170
Query 48224 ATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273
|||| || ||||||||||| |||||||| || |||||||| || || ||
Sbjct 5719171 ATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGC 5719220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931520888024320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |