Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq774 96.9 2e-14
seq841 91.5 1e-12
seq657 86.0 4e-11
seq396 86.0 4e-11
>seq774
Length=5862070
Score = 96.9 bits (106), Expect = 2e-14
Identities = 71/83 (86%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149
|||||||| |||||||||||||| || ||||| |||||||| || ||||||||||||||
Sbjct 3852422 GGTATTCCCCCTGCTCCCAGAGGTGTACCTCAGATTGAAGTAACCTTTGATATTGATGCC 3852481
Query 476150 AATGGTATTCTTAATGTTACTGC 476172
||||| || || ||||| ||||
Sbjct 3852482 AATGGCATCCTGAATGTGTCTGC 3852504
Score = 91.5 bits (100), Expect = 1e-12
Identities = 220/328 (67%), Gaps = 4/328 (1%)
Strand=Plus/Plus
Query 475496 ACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTT 475555
|| || || || ||||| ||||| |||| |||||| || || | | | | ||| ||
Sbjct 3851163 ACCGCATGCGAGCGTGCAAAGCGTACTCTGTCTTCTAGCACGCAGGCCAGTATCGAAATT 3851222
Query 475556 GATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGAT 475615
|||||||| | ||| || ||||| | | || ||||| || ||| ||||||||
Sbjct 3851223 GATTCTCTCTATGAGGGTATTGACTTCTACACATCCATTACCAGAGCTCGCTTTGAAGAG 3851282
Query 475616 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCT 475675
| | |||| || || | || | || || || ||| | | || | ||| |
Sbjct 3851283 CTGAATGCTGACCTGTTCCGTGGCACCCTGGATCCTGTGGAAAAGGCCCTGCGGGATGCC 3851342
Query 475676 AAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCA 475735
||||| |||||||| || ||||||| || || || || || || || || | || |||
Sbjct 3851343 AAACTCGACAAATCGCAGATCCATGACATCGTGCTGGTTGGTGGGTCTACTCGTATCCCA 3851402
Query 475736 AAAATAAGAGAAA-TGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTAA 475793
|| || ||||| |||| || | | || ||||| ||| || | || | || | |
Sbjct 3851403 AAGATTC-AGAAACTGCTG-CAGGACTTCTTCAATGGCAAAGAGCTGAACAAGAGCATCA 3851460
Query 475794 ATCCTGATGAAGCTGTTGCATATGGAGC 475821
|||||||||||||||| || ||||| ||
Sbjct 3851461 ATCCTGATGAAGCTGTGGCTTATGGTGC 3851488
>seq841
Length=5312791
Score = 91.5 bits (100), Expect = 1e-12
Identities = 112/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
|||||| || ||||| ||||| || || || | || |||||||| ||||| ||||||||
Sbjct 4753434 ATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTT 4753493
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736
||| || ||||| |||||| ||||| || ||| || | | ||| ||||| ||
Sbjct 4753494 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACTTCTAGGGTGAT 4753553
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || ||||| || ||||| || || || ||
Sbjct 4753554 GGTCTTGCCGGTCAGGGTCTTCACAAAGATCTG 4753586
>seq657
Length=20762040
Score = 86.0 bits (94), Expect = 4e-11
Identities = 87/111 (78%), Gaps = 2/111 (2%)
Strand=Plus/Minus
Query 474778 TCAAGCAACTAAAGATGC-GGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATG 474836
||| || || |||||||| ||| ||| |||| || | |||||||| | | |||||||
Sbjct 19485882 TCAGGCTACGAAAGATGCTGGGCAGA-TTGCTGGCTTGAATGTTTTGAGGGTGATTAATG 19485824
Query 474837 AACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAATTCTGACAAAG 474887
||||||||||||| |||||||| |||||||| || ||| | |||||||
Sbjct 19485823 AACCAACAGCAGCTGCACTTGCCTATGGTCTGGACAAGTCTGAAGACAAAG 19485773
>seq396
Length=9930490
Score = 86.0 bits (94), Expect = 4e-11
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677
||||| || ||||| |||||||| || || | || ||||| || ||||| |||||||||
Sbjct 5100891 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTG 5100832
Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737
|| || ||||| || ||| ||||| || ||| || | | |||||||| ||
Sbjct 5100831 TCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATG 5100772
Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || || ||||| || ||||| ||
Sbjct 5100771 GTCTTGCCAGTCAGGGTCTTCACAAAAATCTG 5100740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268135318566404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |