Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq252 221 1e-52
seq340 168 8e-37
>seq252
Length=12405487
Score = 221 bits (244), Expect = 1e-52
Identities = 598/909 (66%), Gaps = 7/909 (1%)
Strand=Plus/Minus
Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104
||||||||| || || |||| ||||| || || || |||||| || ||| || |
Sbjct 3158860 TGTGTCGCAAATACTCTTCCAAACATTTCACTGCAAAAGGGTCAACATCAGTGTCAAACT 3158801
Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164
|||| || || | ||||| ||| |||| |||||| || |||||| ||| || |
Sbjct 3158800 TATTAGCAAAGAAGTGGTG---GTTTCGTAGCATCCAGCTCAGGTCTCCTACCCCAAAAA 3158744
Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224
| ||||| || || | ||| | || |||| || ||||| | || ||||| | |||||
Sbjct 3158743 CACAGACAGAGCGAACGTGAATTCCACTGCATGGTGGGTAGGGTGCACCTTTGGACACGT 3158684
Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284
||||||| ||||||||||||| |||||||| || | || | |||||| || ||||
Sbjct 3158683 CACCTTCAAAGTACTGCCACTTGACAAACCTCGCCAGTGCATTCATGTCAGAAACATCGT 3158624
Query 160285 ATTTGTACATCAG-GGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343
| |||| || || | ||| ||||| || || | || || | ||| | || ||||||
Sbjct 3158623 ACTTGT-CACTAGAAGAAACTGCACCTGGGACTTCAGGTATTCTCTGAATTGTTGCCCAC 3158565
Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403
|||| || || |||||||| ||||| || | ||| || ||||||| ||| |||
Sbjct 3158564 AGGTACTCATCTGGGCTGTAAGTGTCTTTTGCCCACTCAATGAACTTAAGTATTTTACTG 3158505
Query 160404 TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAAT 160463
|| |||| || | |||| | || ||||| || || || || || ||
Sbjct 3158504 CTTTCTAGTACGTATTCTACAAATCTTCTGCTAACTACAAAATAGGCACTACCAGAAAAA 3158445
Query 160464 ATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTC 160523
|| || | | ||| || | |||||| || ||||| | || |
Sbjct 3158444 ATTGGAGTACTGAGAGGTGGTAGTTGTTTGTCTATGCCTGTGTTCTTTATTTTACCATCA 3158385
Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCT 160583
| | | | || | || |||||||| || || | ||||| ||| || ||
Sbjct 3158384 ATAATCTCATGGTGTTTTTTCCACCTTACTTCTTTATAAACAGGCATTTTTTCTGTTTCC 3158325
Query 160584 AGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGC 160643
| ||||| |||| | || | ||| | | || || || || |||| ||||| |
Sbjct 3158324 AAGCTGTTTTCACCTTTAAGAGCTTTTAATTTCTCTACTATTTCCTGGTTGGTCTTTATA 3158265
Query 160644 GGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGG 160703
|||||||| || || | |||||| | ||| ||||| || | || ||| ||
Sbjct 3158264 GGAAAGTCAAGGCCACAGAGGTTTATTAGGTATTTCCAGTTTGAACTTCTTCTGTGGAGA 3158205
Query 160704 TCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCT 160763
|| ||||||| ||||| ||||||||||| | ||||| ||||| || || || |||||
Sbjct 3158204 TCTTTCATGCAGTTAATGTCTGCCTGCACCCTACTCCATGAAGCATATACAACACTCTCT 3158145
Query 160764 AGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAG 160823
| | |||| | |||||| ||||| ||||| || || |||||| ||| | ||| ||
Sbjct 3158144 AACTGGCTGGAAATAAAGACATTATCAAAACATGAGACTATTCCCTTCACAG-CAGCAAA 3158086
Query 160824 AACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGAT 160882
|| | || | | |||| ||| || || | || || | |||||||| | |||||
Sbjct 3158085 AAAAGATTCTGGAGACTTTTTGTCAACATGAATACAGTAAAAATTCTGAGGGACATAGAT 3158026
Query 160883 GGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTAT 160942
| || || | || || | |||||| || || |||| | ||| || ||||| || ||
Sbjct 3158025 TGATCTTAGAAGTCTATCAAGCATCTCAATTTTGTGATAAACCACTATTGAGTAAGCAAT 3157966
Query 160943 CGGAAACTC 160951
||||| ||
Sbjct 3157965 TGGAAATTC 3157957
>seq340
Length=24413552
Score = 168 bits (186), Expect = 8e-37
Identities = 609/940 (65%), Gaps = 36/940 (4%)
Strand=Plus/Plus
Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104
|||| ||||| || || || ||||| |||| |||| ||| ||| |||||| |
Sbjct 5935881 TGTGGCGCAGGTGCTCCTCGAGACACTGGATGGCGGCGTTGTCCACGAGGGGGTCGAACT 5935940
Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164
| || || || || ||||| | ||| || | |||| ||||||| || | |||| | |
Sbjct 5935941 TGTTGGCCAAGAGGTGGTGC---TGCTGGAGCAGCCAGGGCACGTCGCCCGCCCCGTAGA 5935997
Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224
|||||||| || |||| |||| ||| |||||||| | || || || ||
Sbjct 5935998 TGCAGACGGCGCGCTGGTGCTGGCCGGCGCAGGGCGGGTAGGGCGCGCCCTTGCTGGTGT 5936057
Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284
| || || |||||||||||| || | | || | || | |||||| ||| | |
Sbjct 5936058 CGCCCTCCAGGTACTGCCACTTGACCAGGCGGGGCAGGGCGTTCATGTCCGAGAGCTGGA 5936117
Query 160285 ATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACA 160344
| |||| || |||| | ||| || || ||||||||||| || | ||||||||||| |
Sbjct 5936118 ACTTGTCATTCTGGGGCATGGCGCCCGGCACGCCGGGCATGCGGTTGAGGGTGGCCCAGA 5936177
Query 160345 GGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT-CTCCGATTAACCTG 160403
|||||||||||||||||| |||||||| | ||| || | ||||| || || | ||
Sbjct 5936178 CGTGTTCGTCGGGGCTGTAGGTGTCCTTGGCCCACTCGAGGAACTGCTGCG----CCGTG 5936233
Query 160404 ----TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGA 160459
|| | || | || ||| ||| | || || |||| ||||||| |||| |
Sbjct 5936234 GGGTTCTCAAAG-ATGTACTGCACGAAGGCCCGTGTGACCACAATGTACGCGTTGCCCGT 5936292
Query 160460 GAATATCGG-TA--TGGGTATAGGCGGC-GTGTCTTTGT-CCTGACCGGTGTTAGACACC 160514
||| || || || || | |||||| || ||| ||| ||| |||| || ||
Sbjct 5936293 GAACATGGGATAGTTGTGCGGTGGCGGCGGTTTCTCTGTGGCTGTCCGGAAGATGA-AC- 5936350
Query 160515 ACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTG--CGGTGGCATGC 160572
||| ||| |||| | | | ||| | || |||| | | | ||| | |
Sbjct 5936351 ------TTCCCCACTTCGTGGTGGTACCGCCAGCGCTCCTGCTTGGGGCCCGAGGCCTTC 5936404
Query 160573 GTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGT 160632
|||| ||| | ||||| || | ||| ||||| ||||||||| | ||
Sbjct 5936405 --TCCGACTCCATGCTGTTCTGCCCCTGCAGCACCTTCAGGGCACGGACGATCTCGATGT 5936462
Query 160633 TCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCA---TTTCGCGC 160689
| ||||||| || || || || ||||| ||| | ||||| ||| | | ||
Sbjct 5936463 TGGTCTTGATGGGGAAATCAGTGCCGCAGGTGTTGAGGACGTAGCGCCACGGCATGGGGC 5936522
Query 160690 TCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGT 160749
|| | |||||||| |||||| || | || ||||||| ||| |||||| || |
Sbjct 5936523 TCCG---CAGCAGGTCCTGCATGCAGTTGAGGTCAGCCTGCAGCCGGGACCAGGAGGCAT 5936579
Query 160750 ACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCA 160809
|||| || | || | || |||||||||||||| ||| || | |||| ||
Sbjct 5936580 ACACCACCTCTTCCAAGCGGCTCGCCACAAAGACGTTGCGGAAGCAGGCTGCGATGGCCC 5936639
Query 160810 CCACCGCCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCT 160869
||| ||| ||| | ||| | ||| | ||| ||||| || | |||||
Sbjct 5936640 GCACGGCCTCTTGGAAGGCGGCCGGGGACTTGCTGTCAATGTGGACGCAGTAGACGTTCT 5936699
Query 160870 GAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGA 160929
| || ||||||| || | || | || ||| ||||| || || || | ||||| || |
Sbjct 5936700 GGGGGGCGTAGAGGGAGCGCAGGAGCCGCTCAAACATGTCGATTTTGTTGTGGATGACCA 5936759
Query 160930 TAGAGTAGGCTATCGGAAACTCGGTCTCCTCGCGACTCAG 160969
| |||||||| || || ||||| | |||||| | |||||
Sbjct 5936760 TGGAGTAGGCGATGGGGAACTCCGCCTCCTCCTGGCTCAG 5936799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577211818809480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |