Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08- 04] 1,023 sequences; 1,178,409,481 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq309 89.7 2e-12 >seq309 Length=123477 Score = 89.7 bits (98), Expect = 2e-12 Identities = 155/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || ||||| || || || ||||| |||| |||||||| || |||||||| | ||| Sbjct 72589 GTCTTGACAGCGGTGTCGATGAGACCCTCACGGCCACCCATGGCGTGGAAGAAGAACTCA 72530 Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTC-GGGCGA--A 302736 || || || | | ||||| |||| ||||| || || ||| |||| | | Sbjct 72529 GTAGGGGTGAGGCCAGCCAGGTAGGAGTTCTCCACGAAGCCCCGGCTCTCAGGGCCATAA 72470 Query 302737 TCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTT 302796 || || |||| | ||||| ||||| || | || || ||||| | ||||| ||||| Sbjct 72469 TCATC---CTTGATGAAGTGGGGCAGCGTGCGGTGCTTGAAGCCGAAGGGGATCCGCTTA 72413 Query 302797 CCATCAACGTTCTGCTGTCCCAGGCAC-GAAATCATCTGC 302835 || || ||||||||||| |||| ||| | ||||| |||| Sbjct 72412 CCCTCCACGTTCTGCTGCCCCA-CCACTGCAATCACCTGC 72374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471798308610751