Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08-
04] 1,023 sequences; 1,178,409,481 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq841 122 8e-23
seq396 105 6e-18
seq537 95.1 1e-14
>seq841
Length=5312791
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || ||||| || || || || || || || || |||
Sbjct 4754435 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACTCTTGAGGTTGAGCCCAGT 4754376
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | ||||| |||||||| ||||| ||||| || || ||||||||
Sbjct 4754375 GACACCATCGAGAATGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAG 4754316
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||| || || || |||||||| ||| | | | | |||| || || |||
Sbjct 4754315 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 4754256
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || |||||||| || || || | ||| |||| ||| | || ||
Sbjct 4754255 ATCCAGAAGGAATCCACCCTGCATCTTGTGCTGCGCTTGAGGGGTGG 4754209
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || ||||| || || || || || ||||| || |||
Sbjct 4753589 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTAGAAGTTGAGCCCAGT 4753530
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || || |||||
Sbjct 4753529 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 4753470
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||| || || || |||||||| ||| | | | | |||| || || |||
Sbjct 4753469 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 4753410
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || |||||||| || || || | ||| |||| ||| | || ||
Sbjct 4753409 ATCCAGAAGGAATCCACCCTGCATCTTGTGCTGCGCTTGAGGGGTGG 4753363
>seq396
Length=9930490
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || || || || || |||
Sbjct 5100965 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 5101024
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || ||||||||
Sbjct 5101025 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAG 5101084
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || |||||||| || | | | |||| || || |||
Sbjct 5101085 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGACGCACCCTGTCTGACTACAAC 5101144
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || |||||||| || || || | ||| |||| || | || |||
Sbjct 5101145 ATCCAGAAGGAATCCACTCTCCATCTTGTGCTGCGCCTGAGGGGTGGC 5101192
>seq537
Length=7949590
Score = 95.1 bits (104), Expect = 1e-14
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182
|| || || ||||| | ||||| ||| || |||||||| || ||||| || | ||||||
Sbjct 7423611 TACTCCACTATTTCTGTACACAGATTGCTGCACTTGATGGTCCCTAAGTTCCGCTGATTG 7423552
Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTC 139232
|| || ||||| || | |||||||| ||||| |||||||||||||| ||
Sbjct 7423551 CTCTTCCGGTTGCACGAGTCTTTGTACAGCATGTACGGTGTGCCAGTCTC 7423502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449891846934440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |